DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5265 and Cpt1c

DIOPT Version :9

Sequence 1:NP_650605.1 Gene:CG5265 / 42074 FlyBaseID:FBgn0038486 Length:643 Species:Drosophila melanogaster
Sequence 2:XP_006229128.1 Gene:Cpt1c / 308579 RGDID:1305384 Length:802 Species:Rattus norvegicus


Alignment Length:625 Identity:158/625 - (25%)
Similarity:284/625 - (45%) Gaps:67/625 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 PNLLKY-HVLP------LEEILNRFMITVQPLLTPEEFKKQEKITNEFQRKEGAKLQKLLEETGE 104
            |.|..: ..||      .:|.:.:::.:::|:|..:.|.....:.|:|.|.:..:||..|:....
  Rat   162 PRLFSFQRALPRQPVPGAQETVRKYLESMRPVLRDDAFDSVVALANDFLRLQAPRLQLYLQLKSW 226

  Fly   105 QEKNWLAHRWLKVAYLQFRSPVTCFSSPGMTFPKQKFESVHEFVDYT---------SRVIFGLGE 160
            ...|:::..|.:..||:.|..:.          ...:..:.:|:..|         ...:..|..
  Rat   227 CASNYVSDWWEEFVYLRSRGSLV----------NSTYYMMQDFLYVTPTPLQAARAGNAVHTLLL 281

  Fly   161 FNDLVHAKKI-PIVKMGKNELDNSQFGKVFGTCRIPRRFTDDIVYNPCSDYVVVIYRNHFYQLKI 224
            :..|::.::| |.:.||...|.::|:.::|.|.|||....|.:.:...|.:|.|.::..|:::..
  Rat   282 YRHLLNRQEIPPTLLMGMRPLCSAQYERMFNTTRIPGVEKDYLCHLQDSQHVAVFHQGRFFRVGT 346

  Fly   225 YDKEGKLIIAPCLAVQLEEIMAKEKEPGVP----YGILTTDSRDNWAEAYEHLSNTPRNRVALKT 285
            :...|  :::|....|..:.:..:..|..|    ...||...|..||:..|.:..  ....||:|
  Rat   347 HSSNG--LLSPRALEQQFQYILDDPSPACPLEEHLAALTAAPRSMWAQVRESVKT--HAATALET 407

  Fly   286 IQNAMFTVSLDE----CTSPKEGRDAEELILTLIHGKGSKCNSANRWMDKTIQLVVNPNGHVGFT 346
            ::.|.|.||||.    .|........:....||:.|:|.     :||.||:..|:|..||.:|.:
  Rat   408 VEGAAFFVSLDSEPAGLTRENPAASLDTYAHTLLTGQGH-----DRWFDKSFTLIVFSNGKLGLS 467

  Fly   347 YEHSPAEGQPIAMMMDYVVKKMKDDPSY---GECGS--ENFIPAKKIKFCDVSKCVEQWLIIAQK 406
            .|||.|:......:.::.:........|   |.|..  :..:|..:....|:.|.::..:.:|.:
  Rat   468 VEHSWADCPVAGHLWEFTLATECFQLGYATDGHCKGHPDPALPKPQRLQWDLPKQIQPSISLALR 532

  Fly   407 NVDKLVQDLQMKVLKFDCYGKDFIKKQRLGPDSFVQMALQLAFFKLHYEPAAQYESAHLRIFDGG 471
            ....|..::...|..|..:||.|||...:..|||:|:.||||.|:...:....||||..|:|..|
  Rat   533 GAKTLSGNIDCHVFPFFHFGKSFIKGCHVSSDSFIQLVLQLAHFRDRGQFCLTYESAMTRLFLEG 597

  Fly   472 RTETIRSCSNESLAFCHAMDDVSASAQERASKIREAVMCHQMYAKLALLGKGVDRHLFGLKLMAV 536
            ||||:|||:.|:..|..||::...:.|:..:..||||..||...|.|:.|:|:|||||.|.:|: 
  Rat   598 RTETVRSCTREACQFVRAMENKERTDQQCLALFREAVDKHQALLKAAMSGQGIDRHLFALYIMS- 661

  Fly   537 ENCLPVPEFFSSPGYVKSTHFRMSTSQVATK---------YDAFM----GYGPSVEDGYACCY-N 587
             ..|.:...|.:  .|:|..:.:||||:..:         |..::    |:||:.:.||...| .
  Rat   662 -RLLHMQSPFLT--QVQSQQWLLSTSQIPVQQTHLFDVHNYPDYVSSGGGFGPAHDHGYGVSYIF 723

  Fly   588 PREHDIILAISAWRHCQATDHQKIAKALAQSFAEMKDVLE 627
            ..|:.|...||:.:....||..::.:.:..:..::..:.:
  Rat   724 MGENAISFHISSKQSSTETDSHRLGQHIEDALLDVASLFQ 763

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5265NP_650605.1 Carn_acyltransf 49..623 CDD:279140 157/617 (25%)
Cpt1cXP_006229128.1 CPT_N 1..46 CDD:293093
Carn_acyltransf 171..758 CDD:279140 156/609 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D559299at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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