DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5265 and Chat

DIOPT Version :10

Sequence 1:NP_650605.1 Gene:CG5265 / 42074 FlyBaseID:FBgn0038486 Length:643 Species:Drosophila melanogaster
Sequence 2:NP_001164064.1 Gene:Chat / 290567 RGDID:1304627 Length:644 Species:Rattus norvegicus


Alignment Length:644 Identity:205/644 - (31%)
Similarity:324/644 - (50%) Gaps:51/644 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 KKMPIASYSTAK-DKPKSDQPNLLKYHVLPLEEILNRFMITVQPLLTPEEFKKQEKITNEFQRKE 91
            :|||:.:.|..: |.||...|        ||::.|..::..:|.|:..|:|:|.:.|...|....
  Rat     9 QKMPVKASSWEELDLPKLPVP--------PLQQTLATYLQCMQHLVPEEQFRKSQAIVKRFGAPG 65

  Fly    92 --GAKLQKLLEETGEQEKNWLAHRWLKVAYLQFRSPVTCFSSPGMTFPKQKFESVHEFVDYTSRV 154
              |..||:.|.|..|:..||::..||...||..|..:...|||.:.|.:|.|:..::.:.:.:.:
  Rat    66 GLGETLQEKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFQDTNDQLRFAACL 130

  Fly   155 IFGLGEFNDLVHAKKIPIVKMGKNELDN-----SQFGKVFGTCRIPRRFTDDIVYN-----PCSD 209
            |.|:..:..|:.:..:| ....|.:|..     .|:.::|.:.|:|....|.:|..     |..:
  Rat   131 ISGVLSYKTLLDSHSLP-TDWAKGQLSGQPLCMKQYYRLFSSYRLPGHTQDTLVAQKSSIMPEPE 194

  Fly   210 YVVVIYRNHFYQLKIYD-----KEGKLIIAPCLAVQLEEIM---AKEKEPGVPYGILTTDSRDNW 266
            :|:|...|.|:.|.:..     .||.|.      .||.:|:   :.|.|...|.|:||:|.|..|
  Rat   195 HVIVACCNQFFVLDVVINFRRLSEGDLF------TQLRKIVKMASNEDERLPPIGLLTSDGRSEW 253

  Fly   267 AEAYEHLSNTPRNRVALKTIQNAMFTVSLDECTSPKEGRDAE-ELILTLIHGKGSKCNSANRWMD 330
            |:|...|.....||.:|..|:..:..|.||   .|..|..:: ...|.|:||.|...|.||||.|
  Rat   254 AKARTVLLKDSTNRDSLDMIERCICLVCLD---GPGTGELSDTHRALQLLHGGGCSLNGANRWYD 315

  Fly   331 KTIQLVVNPNGHVGFTYEHSPAEGQPIAMMMDYVVK-KMKDDPSYGECGSENFIPA-KKIKFCDV 393
            |::|.||..:|..|...||||.:|..:....::::| .|..:.......|.:.:|| :::::   
  Rat   316 KSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMMTSNKKLVRADSVSELPAPRRLRW--- 377

  Fly   394 SKC---VEQWLIIAQKNVDKLVQDLQMKVLKFDCYGKDFIKKQRLGPDSFVQMALQLAFFKLHYE 455
             ||   .:..|..:.:.:.::|::|...|.|||.|||.|||||:..||.|:|:|||||:::|:..
  Rat   378 -KCSPETQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKYSPDGFIQVALQLAYYRLYQR 441

  Fly   456 PAAQYESAHLRIFDGGRTETIRSCSNESLAFCHAMDDVSAS--AQERASKIREAVMCHQMYAKLA 518
            ....||||.:|.|..||.:.|||.:.|:|||..||.|..|:  |.|:...::.|:.....|..:|
  Rat   442 LVPTYESASIRRFQEGRVDNIRSATPEALAFVQAMTDHKAAMPASEKLQLLQTAMQAQTEYTVMA 506

  Fly   519 LLGKGVDRHLFGLKLMAVENCLPVPEFFSSPGYVKSTHFRMSTSQVATKYDAFMGYGPSVEDGYA 583
            :.|..:|.||..|:.:|.:.|...||.|....|:.|..|.:|||||.|..:.|..|||.|.:||.
  Rat   507 ITGMAIDNHLLALRELARDLCKEPPEMFMDETYLMSNRFVLSTSQVPTTMEMFCCYGPVVPNGYG 571

  Fly   584 CCYNPREHDIILAISAWRHCQATDHQKIAKALAQSFAEMKDVLETCPASKDKPPELKCK 642
            .||||:...|...||::..|:.|...:.|:|:..|..:|:|:..:...:..|||..|.|
  Rat   572 ACYNPQPEAITFCISSFHSCKETSSVEFAEAVGASLVDMRDLCSSRQPADSKPPAPKEK 630

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5265NP_650605.1 Carn_acyltransf 54..617 CDD:459926 189/590 (32%)
ChatNP_001164064.1 Carn_acyltransf 26..603 CDD:459926 189/598 (32%)

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