DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5265 and Chat

DIOPT Version :9

Sequence 1:NP_650605.1 Gene:CG5265 / 42074 FlyBaseID:FBgn0038486 Length:643 Species:Drosophila melanogaster
Sequence 2:NP_001164064.1 Gene:Chat / 290567 RGDID:1304627 Length:644 Species:Rattus norvegicus


Alignment Length:644 Identity:205/644 - (31%)
Similarity:324/644 - (50%) Gaps:51/644 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 KKMPIASYSTAK-DKPKSDQPNLLKYHVLPLEEILNRFMITVQPLLTPEEFKKQEKITNEFQRKE 91
            :|||:.:.|..: |.||...|        ||::.|..::..:|.|:..|:|:|.:.|...|....
  Rat     9 QKMPVKASSWEELDLPKLPVP--------PLQQTLATYLQCMQHLVPEEQFRKSQAIVKRFGAPG 65

  Fly    92 --GAKLQKLLEETGEQEKNWLAHRWLKVAYLQFRSPVTCFSSPGMTFPKQKFESVHEFVDYTSRV 154
              |..||:.|.|..|:..||::..||...||..|..:...|||.:.|.:|.|:..::.:.:.:.:
  Rat    66 GLGETLQEKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFQDTNDQLRFAACL 130

  Fly   155 IFGLGEFNDLVHAKKIPIVKMGKNELDN-----SQFGKVFGTCRIPRRFTDDIVYN-----PCSD 209
            |.|:..:..|:.:..:| ....|.:|..     .|:.::|.:.|:|....|.:|..     |..:
  Rat   131 ISGVLSYKTLLDSHSLP-TDWAKGQLSGQPLCMKQYYRLFSSYRLPGHTQDTLVAQKSSIMPEPE 194

  Fly   210 YVVVIYRNHFYQLKIYD-----KEGKLIIAPCLAVQLEEIM---AKEKEPGVPYGILTTDSRDNW 266
            :|:|...|.|:.|.:..     .||.|.      .||.:|:   :.|.|...|.|:||:|.|..|
  Rat   195 HVIVACCNQFFVLDVVINFRRLSEGDLF------TQLRKIVKMASNEDERLPPIGLLTSDGRSEW 253

  Fly   267 AEAYEHLSNTPRNRVALKTIQNAMFTVSLDECTSPKEGRDAE-ELILTLIHGKGSKCNSANRWMD 330
            |:|...|.....||.:|..|:..:..|.||   .|..|..:: ...|.|:||.|...|.||||.|
  Rat   254 AKARTVLLKDSTNRDSLDMIERCICLVCLD---GPGTGELSDTHRALQLLHGGGCSLNGANRWYD 315

  Fly   331 KTIQLVVNPNGHVGFTYEHSPAEGQPIAMMMDYVVK-KMKDDPSYGECGSENFIPA-KKIKFCDV 393
            |::|.||..:|..|...||||.:|..:....::::| .|..:.......|.:.:|| :::::   
  Rat   316 KSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMMTSNKKLVRADSVSELPAPRRLRW--- 377

  Fly   394 SKC---VEQWLIIAQKNVDKLVQDLQMKVLKFDCYGKDFIKKQRLGPDSFVQMALQLAFFKLHYE 455
             ||   .:..|..:.:.:.::|::|...|.|||.|||.|||||:..||.|:|:|||||:::|:..
  Rat   378 -KCSPETQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKYSPDGFIQVALQLAYYRLYQR 441

  Fly   456 PAAQYESAHLRIFDGGRTETIRSCSNESLAFCHAMDDVSAS--AQERASKIREAVMCHQMYAKLA 518
            ....||||.:|.|..||.:.|||.:.|:|||..||.|..|:  |.|:...::.|:.....|..:|
  Rat   442 LVPTYESASIRRFQEGRVDNIRSATPEALAFVQAMTDHKAAMPASEKLQLLQTAMQAQTEYTVMA 506

  Fly   519 LLGKGVDRHLFGLKLMAVENCLPVPEFFSSPGYVKSTHFRMSTSQVATKYDAFMGYGPSVEDGYA 583
            :.|..:|.||..|:.:|.:.|...||.|....|:.|..|.:|||||.|..:.|..|||.|.:||.
  Rat   507 ITGMAIDNHLLALRELARDLCKEPPEMFMDETYLMSNRFVLSTSQVPTTMEMFCCYGPVVPNGYG 571

  Fly   584 CCYNPREHDIILAISAWRHCQATDHQKIAKALAQSFAEMKDVLETCPASKDKPPELKCK 642
            .||||:...|...||::..|:.|...:.|:|:..|..:|:|:..:...:..|||..|.|
  Rat   572 ACYNPQPEAITFCISSFHSCKETSSVEFAEAVGASLVDMRDLCSSRQPADSKPPAPKEK 630

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5265NP_650605.1 Carn_acyltransf 49..623 CDD:279140 190/601 (32%)
ChatNP_001164064.1 Carn_acyltransf 23..611 CDD:395612 193/609 (32%)
Coenzyme A binding. /evidence=ECO:0000305 412..424 7/11 (64%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D167256at33208
OrthoFinder 1 1.000 - - FOG0001049
OrthoInspector 1 1.000 - - mtm9104
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X630
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.920

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