DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5265 and Cpt1a

DIOPT Version :9

Sequence 1:NP_650605.1 Gene:CG5265 / 42074 FlyBaseID:FBgn0038486 Length:643 Species:Drosophila melanogaster
Sequence 2:NP_113747.2 Gene:Cpt1a / 25757 RGDID:2396 Length:773 Species:Rattus norvegicus


Alignment Length:672 Identity:186/672 - (27%)
Similarity:311/672 - (46%) Gaps:94/672 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 FRDNGKV-----LWNFARISALQQTRYTFGKKMPIASYSTAKDKPKSDQPNLLKYHVLPLEEILN 62
            |.::||:     :| .|.:..|.      |:|..:.|:.|          :|.:..|..:::.::
  Rat   137 FAEHGKMSRSTKIW-MAMVKVLS------GRKPMLYSFQT----------SLPRLPVPAVKDTVS 184

  Fly    63 RFMITVQPLLTPEEFKKQEKITNEFQRKEGAKLQKLLEETGEQEKNWLAHRWLKVAYLQFRSPV- 126
            |::.:|:||:..|:|::...:..:|....|.|||..|:.......|:::..|.:..||:.|.|: 
  Rat   185 RYLESVRPLMKEEDFQRMTALAQDFAVNLGPKLQWYLKLKSWWATNYVSDWWEEYIYLRGRGPLM 249

  Fly   127 ---------TCFSSPGMTFPKQKFESVHEFVDYTSRVIFGLGEFNDLVHAKKIPIVKMGKN-ELD 181
                     ..:.:|......:...::|..:.|...:        |....|  ||..:|.. .|.
  Rat   250 VNSNYYAMEMLYITPTHIQAARAGNTIHAILLYRRTL--------DREELK--PIRLLGSTIPLC 304

  Fly   182 NSQFGKVFGTCRIPRRFTDDIVYNPCSDYVVVIYRNHFYQLKIYDKEGKLIIAPCLAVQLEEIM- 245
            ::|:.::|.|.|||...||.|.:...|.::||.:|..::::.:| .:|:|:....|..|:::|: 
  Rat   305 SAQWERLFNTSRIPGEETDTIQHIKDSRHIVVYHRGRYFKVWLY-HDGRLLRPRELEQQMQQILD 368

  Fly   246 -AKEKEPG-VPYGILTTDSRDNWAEAYEHLSNTPRNRVALKTIQNAMFTVSLDECTSPKEGRDAE 308
             ..|.:|| .....||...|..||:..:......:|:.:|..::.|.|.|:|||........|.|
  Rat   369 DPSEPQPGEAKLAALTAADRVPWAKCRQTYFARGKNKQSLDAVEKAAFFVTLDESEQGYREEDPE 433

  Fly   309 ELI----LTLIHGKGSKCNSANRWMDKTIQLVVNPNGHVGFTYEHSPAEGQPIAMMMDYVVKKMK 369
            ..|    .:|:||   :|  .:||.||:|..||..|..:|...|||.|:...:..:.:||:....
  Rat   434 ASIDSYAKSLLHG---RC--FDRWFDKSITFVVFKNSKIGINAEHSWADAPVVGHLWEYVMATDV 493

  Fly   370 DDPSYGECG------SENFIPAKKIKFCDVSKCVEQWLIIAQ-KNVDKLVQDLQMKVLKFDCYGK 427
            ....|.|.|      :.|.....::::....:|.|  :|.|. .:...|..|:.:....||.:||
  Rat   494 FQLGYSEDGHCKGDTNPNIPKPTRLQWDIPGECQE--VIDASLSSASLLANDVDLHSFPFDSFGK 556

  Fly   428 DFIKKQRLGPDSFVQMALQLAFFKLHYEPAAQYESAHLRIFDGGRTETIRSCSNESLAFCHAMDD 492
            ..|||.|..||:|:|:|||||.:|...:....||::..|:|..|||||:|||:.||..|..||.|
  Rat   557 GLIKKCRTSPDAFIQLALQLAHYKDMGKFCLTYEASMTRLFREGRTETVRSCTMESCNFVQAMMD 621

  Fly   493 VSASAQERASKIREAVMCHQMYAKLALLGKGVDRHLFGL----KLMAVENCLPVPEFFSSPGYVK 553
            ..::|::|....:.|...||...:||:.|.|:|||||.|    |.:||::.. :.|..|.|    
  Rat   622 PKSTAEQRLKLFKIACEKHQHLYRLAMTGAGIDRHLFCLYVVSKYLAVDSPF-LKEVLSEP---- 681

  Fly   554 STHFRMSTSQVATKYDAFM-------------GYGPSVEDGYACCY-NPREHDIILAISAWRHCQ 604
               :|:||||...:.....             |:||..:|||...| ...|:.|...||:.....
  Rat   682 ---WRLSTSQTPQQQVELFDFEKNPDYVSCGGGFGPVADDGYGVSYIIVGENFIHFHISSKFSSP 743

  Fly   605 ATDHQKIAKALAQSFAEMKDVL 626
            .||..:..|.|.|:   |.|::
  Rat   744 ETDSHRFGKHLRQA---MMDII 762

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5265NP_650605.1 Carn_acyltransf 49..623 CDD:279140 174/616 (28%)
Cpt1aNP_113747.2 CPT_N 1..47 CDD:406797
Carn_acyltransf 171..761 CDD:395612 175/618 (28%)
Coenzyme A binding. /evidence=ECO:0000250 555..567 6/11 (55%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D559299at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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