DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5265 and cpt-4

DIOPT Version :9

Sequence 1:NP_650605.1 Gene:CG5265 / 42074 FlyBaseID:FBgn0038486 Length:643 Species:Drosophila melanogaster
Sequence 2:NP_504348.1 Gene:cpt-4 / 178889 WormBaseID:WBGene00019644 Length:748 Species:Caenorhabditis elegans


Alignment Length:651 Identity:161/651 - (24%)
Similarity:293/651 - (45%) Gaps:112/651 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 PNLLKYHVLP-LEEILNRFMITVQPLLTPEEFKKQEKITNEFQRKEGAKLQKLLEETGEQEKNWL 110
            |||    .|| |::.::|::.:::.|::.|::.:..:::.:|...||..:|:......:...|::
 Worm   142 PNL----PLPALQDTVDRYVDSMKHLMSEEDYDQLLEMSRKFVSNEGRSIQRYAWFLHKFTDNYV 202

  Fly   111 AHRWLKVAYLQFRSPVTCFSSPGMTFPKQKFESVHEFVDYTSRVIFGLGEFNDLVHAKKI----- 170
            ...|.:..|:..|.|:...|            ||.:...|        || :||:.|.::     
 Worm   203 TSLWEQYIYMAGRYPLLINS------------SVAQCTMY--------GE-SDLIQAYQVARLIY 246

  Fly   171 ------------PIVKMGKNELDNSQFGKVFGTCRIPRRFTDDIVYNPCSDYVVVIYRNHFYQLK 223
                        ..:.:|:..:....:..::..||||.:..|...:|..:.:|::::...:|::.
 Worm   247 IETIANLALDRQKYMAIGEGLMSTRHYRNIYNGCRIPGKQYDSFQWNKPAKHVILVHDCTWYKVD 311

  Fly   224 IYDKEGKLIIAPCLAVQLEEIMAK-EKEPGVPYGI--LTTDSRDNW-AEAYEHLSNTPRNRVALK 284
            |.|..|:|.....||..:.|:|.: :|..|....|  ||||.|..| :...:.......|:..|:
 Worm   312 ICDSNGQLYTVDQLAKIVAEVMGRDDKSKGYLRNIASLTTDRRTEWCSNRQKFFLENKHNQKLLQ 376

  Fly   285 TIQNAMFTVSLD-------ECTSPKEGRDAEELILTLIHGKGSKCNSANRWMDKTIQLVVNPNGH 342
            .|:.|.|.:|:|       |.|     ....:.:..::.|.||     |||:|||:...|:.:|.
 Worm   377 QIETAQFVMSVDGDLNWGVETT-----EQLSKYMKDMLAGSGS-----NRWVDKTMNYAVDASGR 431

  Fly   343 VGFTYEHSPAEGQPIAMMMDYVV---KKMKDDPSYGE---------CGSENFIPAKKIKF----- 390
            .|.|.||||.:|..:..:.:.|:   |::...||..|         ....:...|:|:.|     
 Worm   432 AGATGEHSPCDGAELDHLCENVLNVDKQVLVSPSTEEQLEIIKMTFTEKNSLRLAQKLDFQEVDG 496

  Fly   391 --CDVSKCVEQWLIIAQKNVDKLVQDLQMKVLKFDCYGKDFIKKQRLGPDSFVQMALQLA----- 448
              .:|::|.||.        .|...||.|..:.|..:||..:||..:.||.|:|||:|||     
 Worm   497 METEVNRCFEQH--------HKASDDLHMHSIAFTDFGKGRVKKCGISPDGFLQMAIQLANYYDQ 553

  Fly   449 -FFKLHYEPAAQYESAHLRIFDGGRTETIRSCSNESLAFCHAMDDVSASAQERASKIREAVMCHQ 512
             .|.|.|||.:      :|.:...||||:|..::.|..|..||....::.:||...:::|...|.
 Worm   554 GKFVLTYEPGS------VRFYANSRTETLRPVTDYSCKFVQAMLSDESTQKERRDLLKKACEAHV 612

  Fly   513 MYAKLALLGKGVDRHLFGLKLMA--VENCLPVPEFFSSPGYVKST----HFRMSTSQVATKYDAF 571
            ...|..:.|||||||||.|.::|  :....|..|.:::..::.||    :...|..:..::.:..
 Worm   613 ENCKEVMTGKGVDRHLFVLCVLAKGLGYSSPFLEEYANQKWLLSTSNIPNMTNSVDEDISEDNIM 677

  Fly   572 MG--YGPSVEDGYACCYN-PREHDIILAISAWRHCQATDHQKIAKALAQSFAEMKDVLETCPASK 633
            :|  :|...:|||..||. .....|::.|:::....|||..:..:.|.::...:.|:.:..|::.
 Worm   678 LGASFGAVAQDGYGICYRFAGNRAIMVHITSYHSSPATDSDRFGQHLREAIHTLADLFDDEPSNN 742

  Fly   634 D 634
            :
 Worm   743 N 743

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5265NP_650605.1 Carn_acyltransf 49..623 CDD:279140 157/636 (25%)
cpt-4NP_504348.1 Carn_acyltransf 150..731 CDD:376382 153/625 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D559299at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

Return to query results.
Submit another query.