DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5265 and Cpt1b

DIOPT Version :9

Sequence 1:NP_650605.1 Gene:CG5265 / 42074 FlyBaseID:FBgn0038486 Length:643 Species:Drosophila melanogaster
Sequence 2:NP_034078.2 Gene:Cpt1b / 12895 MGIID:1098297 Length:772 Species:Mus musculus


Alignment Length:635 Identity:189/635 - (29%)
Similarity:299/635 - (47%) Gaps:78/635 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 SDQPNLLKYHVLPLEEILNRFMITVQPLLTPEEFKKQEKITNEFQRKEGAKLQKLLEETGEQEKN 108
            |.|.:|.|..|..:...::|::.:|:|||..|.:.:.|.:..|||.|...:|||.|........|
Mouse   168 SFQTSLPKLPVPSVPATIHRYLDSVRPLLDDEAYYRMETLAKEFQDKTAPRLQKYLVLKSWWATN 232

  Fly   109 WLAHRWLKVAYLQFRSPVTCFSS-PGMTFPKQK---------FESVHEFVDYTSRVIFGLGEFND 163
            :::..|.:..||:.|||:...|: ..|.|...|         ..:||..:.|..::        |
Mouse   233 YVSDWWEEYVYLRSRSPLMVNSNYYAMDFVLIKNTNVQAARLGNAVHAMIMYRRKL--------D 289

  Fly   164 LVHAKKIPIVKMGKNELDNSQFGKVFGTCRIPRRFTDDIVYNPCSDYVVVIYRNHFYQLKIYDKE 228
            ....|  |::.:|...:.:.|..::|.|.|||.:.||.:.:...|.:|.|.::..|:::.:|  |
Mouse   290 REEIK--PVMALGMVPMCSYQMERMFNTTRIPGKETDLLQHLSESRHVAVYHKGRFFKVWLY--E 350

  Fly   229 GKLIIAP-CLAVQLEEIMAKEKEPGVP------YGILTTDSRDNWAEAYEHLSNTPRNRVALKTI 286
            |..::.| .|.:|.:.|:   .:|..|      ...||...|..||||.:...::.:|:::|..|
Mouse   351 GSRLLKPRDLEMQFQRIL---DDPSPPQPGEEKLAALTAGGRVEWAEARQTFFSSGKNKMSLDAI 412

  Fly   287 QNAMFTVSLDE---CTSPKEGRDAEELILTLIHGKGSKCNSANRWMDKTIQLVVNPNGHVGFTYE 348
            :.|.|.|:|||   |.:|.:..........|:||     |..|||.||:..|:...||.:|...|
Mouse   413 ERAAFFVTLDEDSHCYNPDDETSLSLYGKALLHG-----NCYNRWFDKSFTLISCKNGLLGLNTE 472

  Fly   349 HSPAEGQPIAMMMDYVVKKMKDDPSYGECG------SENFIPAKKIKFCDVSKC---VEQWLIIA 404
            ||.|:...|..:.::|:........|.|.|      :....|.:::.:....:|   :|....:|
Mouse   473 HSWADAPIIGHLWEFVLGTDTFHLGYTETGHCVGEPNTTLPPPQRLPWDIPEQCREAIENSYQVA 537

  Fly   405 QKNVDKLVQDLQMKVLKFDCYGKDFIKKQRLGPDSFVQMALQLAFFKLHYEPAAQYESAHLRIFD 469
            :    .|..|:::...:|..:||..|||.|..||:|||:|||||.|:...:....||::..|:|.
Mouse   538 K----ALADDVELYCFQFLPFGKGLIKKCRTSPDAFVQIALQLAHFRDKGKFCLTYEASMTRMFR 598

  Fly   470 GGRTETIRSCSNESLAFCHAMDDVSASAQERASKIREAVMCHQMYAKLALLGKGVDRHLFGLKLM 534
            .|||||:|||:|||.||..||...|...|:.....|:|...||...:||:.|.|:|||||.|.: 
Mouse   599 EGRTETVRSCTNESAAFVQAMMKGSHKKQDLQDLFRKASEKHQNMYRLAMTGAGIDRHLFCLYI- 662

  Fly   535 AVENCLPVPEFFSSP--GYVKSTHFRMSTSQV----ATKYD---------AFMGYGPSVEDGYAC 584
             |...|.|    |||  ..|.|..:.:||||:    ...:|         |..|:||..:|||..
Mouse   663 -VSKYLGV----SSPFLAEVLSEPWSLSTSQIPQFQICMFDPKQYPNHLGAGGGFGPVADDGYGV 722

  Fly   585 CYN-PREHDIILAISAWRHCQATDHQKIAKALAQSFAEMKDVLETCPASK 633
            .|. ..|:.:...||:......|:.|:....:.|:   :.|:.|....||
Mouse   723 SYMIAGENTMFFHISSKYSSSETNAQRFGNHIRQA---LLDIAELFKISK 769

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5265NP_650605.1 Carn_acyltransf 49..623 CDD:279140 183/618 (30%)
Cpt1bNP_034078.2 CPT_N 1..46 CDD:293093
Carn_acyltransf 173..761 CDD:279140 183/620 (30%)
Coenzyme A binding. /evidence=ECO:0000250 555..567 6/11 (55%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D559299at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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