DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5265 and Cpt1a

DIOPT Version :9

Sequence 1:NP_650605.1 Gene:CG5265 / 42074 FlyBaseID:FBgn0038486 Length:643 Species:Drosophila melanogaster
Sequence 2:XP_011246904.1 Gene:Cpt1a / 12894 MGIID:1098296 Length:798 Species:Mus musculus


Alignment Length:673 Identity:187/673 - (27%)
Similarity:315/673 - (46%) Gaps:77/673 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKFRDNGKVL-----WNFARISALQQTRYTFGKKMPIASYSTAKDKPKSDQPNLLKYHVLPLEEI 60
            |..|.:.|||     |.||....:.::...:...:.:  :|..|....|.|.:|.:..|..:::.
Mouse   145 MTMRYSLKVLLSYHGWMFAEHGKMSRSTRIWMAMVKV--FSGRKPMLYSFQTSLPRLPVPAVKDT 207

  Fly    61 LNRFMITVQPLLTPEEFKKQEKITNEFQRKEGAKLQKLLEETGEQEKNWLAHRWLKVAYLQFRSP 125
            ::|::.:|:||:...:|::...:..:|....|.|||..|:.......|:::..|.:..||:.|.|
Mouse   208 VSRYLESVRPLMKEGDFQRMTALAQDFAVNLGPKLQWYLKLKSWWATNYVSDWWEEYIYLRGRGP 272

  Fly   126 V----------TCFSSPGMTFPKQKFESVHEFVDYTSRVIFGLGEFNDLVHAKKIPIVKMGKN-E 179
            :          ..:.:|......:...::|..:.|...|        |....|  ||..:|.. .
Mouse   273 IMVNSNYYAMEMLYITPTHIQAARAGNTIHAILLYRRTV--------DREELK--PIRLLGSTIP 327

  Fly   180 LDNSQFGKVFGTCRIPRRFTDDIVYNPCSDYVVVIYRNHFYQLKIYDKEGKLIIAPCLAVQLEEI 244
            |.::|:.::|.|.|||...||.|.:...|.::||.:|..::::.:| .:|:|:....|..|:::|
Mouse   328 LCSAQWERLFNTSRIPGEETDTIQHVKDSRHIVVYHRGRYFKVWLY-HDGRLLRPRELEQQMQQI 391

  Fly   245 M--AKEKEPG-VPYGILTTDSRDNWAEAYEHLSNTPRNRVALKTIQNAMFTVSLDECTSPKEGRD 306
            :  ..|.:|| .....||...|..||:..:......:|:.:|..::.|.|.|:|||........|
Mouse   392 LDDTSEPQPGEAKLAALTAADRVPWAKCRQTYFARGKNKQSLDAVEKAAFFVTLDESEQGYREED 456

  Fly   307 AEELI----LTLIHGKGSKCNSANRWMDKTIQLVVNPNGHVGFTYEHSPAEGQPIAMMMDYVVKK 367
            .|..|    .:|:||   :|  .:||.||:|..||..|..:|...|||.|:...:..:.:||:..
Mouse   457 PEASIDSYAKSLLHG---RC--FDRWFDKSITFVVFKNSKIGINAEHSWADAPIVGHLWEYVMAT 516

  Fly   368 MKDDPSYGECG------SENFIPAKKIKFCDVSKCVEQWLIIAQKNVDKLVQDLQMKVLKFDCYG 426
            ......|.|.|      :.|.....::::....:| ::.:..:..:...|..|:.:....||.:|
Mouse   517 DVFQLGYSEDGHCKGDKNPNIPKPTRLQWDIPGEC-QEVIETSLSSASFLANDVDLHSFPFDTFG 580

  Fly   427 KDFIKKQRLGPDSFVQMALQLAFFKLHYEPAAQYESAHLRIFDGGRTETIRSCSNESLAFCHAMD 491
            |..|||.|..||:|:|:|||||.:|...:....||::..|:|..|||||:|||:.||..|..||.
Mouse   581 KGLIKKCRTSPDAFIQLALQLAHYKDMGKFCLTYEASMTRLFREGRTETVRSCTTESCNFVLAMM 645

  Fly   492 DVSASAQERASKIREAVMCHQMYAKLALLGKGVDRHLFGL----KLMAVENCLPVPEFFSSPGYV 552
            |.:.:|::|....:.|...||...:||:.|.|:|||||.|    |.:||::.. :.|..|.|   
Mouse   646 DPTTTAEQRFKLFKIACEKHQHLYRLAMTGAGIDRHLFCLYVVSKYLAVDSPF-LKEVLSEP--- 706

  Fly   553 KSTHFRMSTSQVA---------TKYDAFM----GYGPSVEDGYACCY-NPREHDIILAISAWRHC 603
                :|:||||..         .||..::    |:||..:|||...| ...|:.|...||:....
Mouse   707 ----WRLSTSQTPQQQVELFDFEKYPDYVSCGGGFGPVADDGYGVSYIIVGENFIHFHISSKFSS 767

  Fly   604 QATDHQKIAKALAQSFAEMKDVL 626
            ..||..:..|.|.|:   |.|::
Mouse   768 PETDSHRFGKHLRQA---MMDII 787

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5265NP_650605.1 Carn_acyltransf 49..623 CDD:279140 173/615 (28%)
Cpt1aXP_011246904.1 CPT_N 26..71 CDD:374569
Carn_acyltransf 196..786 CDD:376382 174/617 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D559299at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

Return to query results.
Submit another query.