DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5265 and cpt1a

DIOPT Version :10

Sequence 1:NP_650605.1 Gene:CG5265 / 42074 FlyBaseID:FBgn0038486 Length:643 Species:Drosophila melanogaster
Sequence 2:XP_004913491.2 Gene:cpt1a / 100490391 XenbaseID:XB-GENE-29077111 Length:778 Species:Xenopus tropicalis


Alignment Length:677 Identity:187/677 - (27%)
Similarity:322/677 - (47%) Gaps:104/677 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 FRDNGKV-----LWNFARISALQQTRYTFGKKMPIASYSTAKDKPKSDQPNLLKYHVLPLEEILN 62
            |.::||:     :|       :...:...|:|..:.|:.|          :|.:..|.|:::.:.
 Frog   138 FEEHGKLSASTRIW-------MGMVKLLSGRKPMLYSFQT----------SLPRLPVPPVKDTVK 185

  Fly    63 RFMITVQPLLTPEEFKKQEKITNEFQRKEGAKLQKLLEETGEQEKNWLAHRWLKVAYLQFRSPVT 127
            |::.:|:||:..|:|::.|.:..:|....|.:||..|:.......|:::..|.:..||:.|.|:.
 Frog   186 RYLDSVKPLMDKEKFERMEGLAKDFANNLGPRLQWYLKLKSWWATNYVSDWWEEYIYLRGRGPIM 250

  Fly   128 CFSS----------PGMTFPKQKFESVHEFVDYTSRVIFGLGEFNDLVHAKKIPIVKMGKN-ELD 181
            ..|:          |......:...::|..:.|..::        |....|  ||..||.. .|.
 Frog   251 VNSNYYAMDFLYVLPTHIQAARAGNAIHAILLYRRKL--------DREEIK--PIQLMGSTVPLC 305

  Fly   182 NSQFGKVFGTCRIPRRFTDDIVYNPCSDYVVVIYRNHFYQLKIYDKEGKLIIAPCLAVQLEEIM- 245
            ::|:.:::.|.|||...||.|.:...|.::||.::..::::.:| .:|:|:....:..|:::|: 
 Frog   306 SAQWERMYNTSRIPGEETDTIQHVKDSKHIVVYHKGRYFKVWLY-HDGRLLKPREIEHQMQKIID 369

  Fly   246 -AKEKEPG-VPYGILTTDSRDNWAEAYEHLSNTPRNRVALKTIQNAMFTVSLDECTSPKEGRDAE 308
             ....:|| .....||...|..||:|.:......:|:.::..::.|.|.|:|||   .::|.:.|
 Frog   370 DTSSPQPGEEKLAALTAGDRVPWAKARKAYFANGKNKQSMDAVEKAAFFVTLDE---TEQGYNKE 431

  Fly   309 ELI-------LTLIHGKGSKCNSANRWMDKTIQLVVNPNGHVGFTYEHSPAEGQPIAMMMDYVVK 366
            :.:       .:|:||   ||  .:||.|||:..||..||.:|...|||.|:...:..:.:||:.
 Frog   432 DPVNSLDSYAKSLLHG---KC--YDRWFDKTMSFVVFKNGKMGMNVEHSWADAPIVGHLWEYVMA 491

  Fly   367 KMKDDPSYGECG------SENFIPAKKIKFCDVSKC---VEQWLIIAQKNVDKLVQDLQMKVLKF 422
            ..|.:..|.|.|      :.|..|..::::....:|   ||:.|.:|:    .|..|:......|
 Frog   492 TDKMELGYNEDGHCKGDVNGNIPPPSRLQWDIPEECQNVVEESLTVAK----ALADDVDFHSFPF 552

  Fly   423 DCYGKDFIKKQRLGPDSFVQMALQLAFFKLHYEPAAQYESAHLRIFDGGRTETIRSCSNESLAFC 487
            |.:||..|||.|..||:|||::||||.::...:....||::..|:|..|||||:|||:.||..|.
 Frog   553 DSFGKGLIKKSRTSPDAFVQLSLQLAHYRDKEKFCLTYEASMTRLFREGRTETVRSCTIESCDFV 617

  Fly   488 HAMDDVSASAQERASKIREAVMCHQMYAKLALLGKGVDRHLFGL----KLMAVENCLPVPEFFSS 548
            .||.|.|.:.::|....:||...||...:||:.|.|:|||||.|    |.:.|::.. :.|..|.
 Frog   618 LAMSDPSQTNEKRLQLFKEAAEKHQQMYRLAMTGSGIDRHLFCLYVVSKYLGVDSPF-LKEVLSE 681

  Fly   549 PGYVKSTHFRMSTSQVAT------KYDAFM-------GYGPSVEDGYACCY-NPREHDIILAISA 599
            |       :|:||||...      :.:.|.       |:||..:|||...| ...|:.|...||:
 Frog   682 P-------WRLSTSQTPQQQVHLFQLEKFPENVSSGGGFGPVADDGYGVSYIIVGENLINFHISS 739

  Fly   600 WRHCQATDHQKIAKALAQSFAEMKDVL 626
            ......||..:..|.:.|:   |.|:|
 Frog   740 KFSSPETDSHRFGKHIKQA---MIDIL 763

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5265NP_650605.1 Carn_acyltransf 54..617 CDD:459926 174/610 (29%)
cpt1aXP_004913491.2 CPT_N 1..47 CDD:465132
Carn_acyltransf 175..757 CDD:459926 174/612 (28%)
Blue background indicates that the domain is not in the aligned region.

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