DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5255 and LOC683849

DIOPT Version :9

Sequence 1:NP_650604.1 Gene:CG5255 / 42073 FlyBaseID:FBgn0038485 Length:273 Species:Drosophila melanogaster
Sequence 2:XP_003749780.1 Gene:LOC683849 / 683849 RGDID:1597830 Length:246 Species:Rattus norvegicus


Alignment Length:252 Identity:79/252 - (31%)
Similarity:133/252 - (52%) Gaps:21/252 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LILLPLVLFTSSAASQILYPPQYTKNRIVGGEEAAAGLAPYQISLQGIGSGAHSCGGAIIDERWI 67
            |::|.||      .:.:.:|.. ..::||||........|||:||   .||.|.|||::|:::|:
  Rat     4 LLILALV------GTAVAFPVD-DDDKIVGGYTCQENSVPYQVSL---NSGYHFCGGSLINDQWV 58

  Fly    68 ITAAHCTRGRQATAFRVLTGTQDLH--QNGSKYYYPDRIVEHSNYAPRKYRNDIALLHLNESIVF 130
            ::||||.:.|    .:|..|..:::  :...::....:|::|.|:..:...|||.|:.|:..:..
  Rat    59 VSAAHCYKSR----IQVRLGEHNINVLEGNEQFVNAAKIIKHPNFDRKTLNNDIMLIKLSSPVKL 119

  Fly   131 DNATQPVELDHEALVPGSRLLLTGWG-TLSLGGDVPARLQSLEVNYVPFEQCRAAHDNSTRVDIG 194
            :.....|.|.......|::.|::||| |||.|.:.|..||.|:...:|...|.|::..  ::...
  Rat   120 NARVATVALPSSCAPAGTQCLISGWGNTLSFGVNEPDLLQCLDAPLLPQADCEASYPG--KITDN 182

  Fly   195 HVCT-FNDKGRGACHGDSGGPLVHNGKLVALVNWGLPCA-KGYPDAHASISYYHDFI 249
            .||. |.:.|:.:|.||||||:|.||:|..:|:||..|| ...|..:..:..|.|:|
  Rat   183 MVCAGFLEGGKDSCQGDSGGPVVCNGELQGIVSWGYGCALPDNPGVYTKVCNYVDWI 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5255NP_650604.1 Tryp_SPc 29..249 CDD:214473 73/224 (33%)
Tryp_SPc 30..252 CDD:238113 74/225 (33%)
LOC683849XP_003749780.1 Tryp_SPc 23..239 CDD:214473 73/224 (33%)
Tryp_SPc 24..242 CDD:238113 74/225 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D469244at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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