DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5255 and 2210010C04Rik

DIOPT Version :9

Sequence 1:NP_650604.1 Gene:CG5255 / 42073 FlyBaseID:FBgn0038485 Length:273 Species:Drosophila melanogaster
Sequence 2:NP_075822.3 Gene:2210010C04Rik / 67373 MGIID:1914623 Length:247 Species:Mus musculus


Alignment Length:247 Identity:78/247 - (31%)
Similarity:129/247 - (52%) Gaps:14/247 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 VLFTSSAASQILYPPQYTKNRIVGGEEAAAGLAPYQISLQGIGSGAHSCGGAIIDERWIITAAHC 73
            ::|.:...:.:..|.....::||||........|||:||   .||.|.|||::|:.:|:::||||
Mouse     4 LIFLAFLGAAVALPLDDDDDKIVGGYTCQRNALPYQVSL---NSGYHFCGGSLINSQWVVSAAHC 65

  Fly    74 TRGRQATAFRVLTGTQ--DLHQNGSKYYYPDRIVEHSNYAPRKYRNDIALLHLNESIVFDNATQP 136
            .:.|    .:|..|..  |..:.|.::....:|:.|.||....|.|||.|:.|..:...::....
Mouse    66 YKSR----IQVRLGEHNIDALEGGEQFIDAAKIIRHPNYNANTYNNDIMLIKLKTAATLNSRVST 126

  Fly   137 VELDHEALVPGSRLLLTGWG-TLSLGGDVPARLQSLEVNYVPFEQCRAAHDNSTRVDIGHVCT-F 199
            |.|.......|:|.|::||| |||.|.:.|:.||.|:...:....|.:::..  ::.....|. |
Mouse   127 VALPRSCPSAGTRCLVSGWGNTLSSGTNYPSLLQCLDAPVLSDSSCTSSYPG--KITSNMFCLGF 189

  Fly   200 NDKGRGACHGDSGGPLVHNGKLVALVNWGLPCA-KGYPDAHASISYYHDFIR 250
            .:.|:.:|.||||||:|.||:|..:|:||..|| :|.|..:..:..|.::|:
Mouse   190 LEGGKDSCQGDSGGPVVCNGQLQGVVSWGYGCAQRGKPGVYTKVCKYVNWIQ 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5255NP_650604.1 Tryp_SPc 29..249 CDD:214473 75/224 (33%)
Tryp_SPc 30..252 CDD:238113 76/226 (34%)
2210010C04RikNP_075822.3 Tryp_SPc 24..240 CDD:214473 75/224 (33%)
Tryp_SPc 25..243 CDD:238113 76/226 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D469244at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.