DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5255 and CG17239

DIOPT Version :9

Sequence 1:NP_650604.1 Gene:CG5255 / 42073 FlyBaseID:FBgn0038485 Length:273 Species:Drosophila melanogaster
Sequence 2:NP_001259920.1 Gene:CG17239 / 59224 FlyBaseID:FBgn0042186 Length:248 Species:Drosophila melanogaster


Alignment Length:236 Identity:71/236 - (30%)
Similarity:110/236 - (46%) Gaps:20/236 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 AASQILYPPQYTKNRIVGGEEAAAGLAPYQISLQGIGSGAHSCGGAIIDERWIITAAHCTRGRQA 79
            |.|..:....:...|||||:.......|:|.|:  :..|...||.||..|..:||||||...|:.
  Fly     9 AFSVTVVSSNWIPERIVGGDLITILSVPWQASI--LRLGRFHCGAAIYSEDIVITAAHCLTDRET 71

  Fly    80 TAFRVLTGTQDLHQNGSKYYYPDRIVE------HSNYAPRKYRNDIALLHLNESIVFDNATQPVE 138
            ....|..|:       |..::..::|.      |..| .:.:.||||::.|...:...:|...:.
  Fly    72 EFLSVRVGS-------SFTFFGGQVVRVSSVLLHEEY-DQSWSNDIAVMRLQSKLRLGSAVSVIP 128

  Fly   139 LDHEALVPGSRLLLTGWGTLSLGGDVPARLQSLEVNYVPFEQCRAAHDNSTRVDIGHVCTFNDKG 203
            |.......||...::|||.:....:.|..:.|..|:.|..:|||.::......|:  :|. ...|
  Fly   129 LADTPPASGSPATVSGWGAIGFKKNYPMSILSASVDIVDQDQCRRSYGRKITKDM--ICA-AAPG 190

  Fly   204 RGACHGDSGGPLVHNGKLVALVNWGLPCA-KGYPDAHASIS 243
            :.||.||||||||...|||.:|::|..|| ..||..:|:::
  Fly   191 KDACSGDSGGPLVSGNKLVGIVSFGKECAHPEYPGVYANVA 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5255NP_650604.1 Tryp_SPc 29..249 CDD:214473 69/222 (31%)
Tryp_SPc 30..252 CDD:238113 68/221 (31%)
CG17239NP_001259920.1 Tryp_SPc 23..237 CDD:214473 69/222 (31%)
Tryp_SPc 24..237 CDD:238113 68/221 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D469244at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.920

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