DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5255 and prtn3

DIOPT Version :9

Sequence 1:NP_650604.1 Gene:CG5255 / 42073 FlyBaseID:FBgn0038485 Length:273 Species:Drosophila melanogaster
Sequence 2:NP_001006847.1 Gene:prtn3 / 448597 XenbaseID:XB-GENE-5805214 Length:245 Species:Xenopus tropicalis


Alignment Length:255 Identity:82/255 - (32%)
Similarity:122/255 - (47%) Gaps:27/255 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LLILLPLVLFTSSAASQILYPPQYTKNRIVGGEEAAAGLAPYQISLQGIGSGAHSCGGAIIDERW 66
            ||:.|.::.     |||:.....:|  :||||.||.....||..|||  ..|.|.|||::|..::
 Frog     5 LLVTLSILW-----ASQVNGGSMHT--QIVGGREATPNSHPYIASLQ--LRGRHFCGGSLIAPQF 60

  Fly    67 IITAAHCTRGRQATAFRVLTGTQDLHQN-GSKYYYPDRIVEHSNYAPRKYRNDIALLHLNESIVF 130
            ::|||||.....:....|:.|...|..| .:|..:....|..:.:.|...:|||.:|.|:..:..
 Frog    61 LMTAAHCMENTASNLVTVVLGAHSLRANEATKQRFRVNQVFENGFNPLTLQNDIVILKLDRPVSL 125

  Fly   131 DNATQPVELD--HEALVPGSRLLLTGWGTLSLGGDVPARLQSLEVNYVPFEQCRAAHDNSTRVDI 193
            :...|.|.|.  :|.:..|::.:..|||.||..|.:|.|||.|.|.......||.          
 Frog   126 NGKVQVVSLPSANEDVPAGTQCVTAGWGRLSTEGQIPDRLQELNVTVTRQNLCRP---------- 180

  Fly   194 GHVCT--FNDKGRGACHGDSGGPLVHNGKLVALVNWGL-PCAKGY-PDAHASISYYHDFI 249
            .::||  |..:. |.|.||||||||.||.:..:.::.: .|..|. ||..:.:|.:..||
 Frog   181 NNICTGVFMQQA-GICFGDSGGPLVCNGVIQGITSFIIRSCGNGVTPDFFSRVSLFRRFI 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5255NP_650604.1 Tryp_SPc 29..249 CDD:214473 73/226 (32%)
Tryp_SPc 30..252 CDD:238113 75/227 (33%)
prtn3NP_001006847.1 Tryp_SPc 26..241 CDD:238113 75/227 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D469244at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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