DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5255 and Tmprss11c

DIOPT Version :10

Sequence 1:NP_650604.1 Gene:CG5255 / 42073 FlyBaseID:FBgn0038485 Length:273 Species:Drosophila melanogaster
Sequence 2:NP_001025468.1 Gene:Tmprss11c / 435845 MGIID:3521861 Length:431 Species:Mus musculus


Alignment Length:248 Identity:80/248 - (32%)
Similarity:118/248 - (47%) Gaps:34/248 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 NRIVGGEEAAAGLAPYQISLQGIGSGAHSCGGAIIDERWIITAAHC-TRGRQATAFRVLTGTQDL 91
            :::.||::|..|..|:|.|||  .:..|.||..:|...|:|||||| .|......::|..|..  
Mouse   198 HKVAGGQDAEEGEWPWQASLQ--QNSVHRCGATLISNYWLITAAHCFIRAANPKDWKVSFGFL-- 258

  Fly    92 HQNGSKYYYP---DRIVEHSNYAPRKYRNDIALLHLNESIVFDN---------ATQPVELDHEAL 144
               .||...|   ..|:.|.||:...:.||||::.|:..:::::         |||       ..
Mouse   259 ---LSKPQAPRAVKNIIIHENYSYPAHDNDIAVVRLSSPVLYESNIRRACLPEATQ-------KF 313

  Fly   145 VPGSRLLLTGWGTLSLGGDVPARLQSLEVNYVPFEQCRAAHDNSTRVDIGHVCTFNDKGR-GACH 208
            .|.|.:::||||||...||.|..||..:|..:..:.|.:.......:..|.:|....||| .||.
Mouse   314 PPNSDVVVTGWGTLKSDGDSPNILQKGKVKIIDNKTCNSGKAYGGMITPGMMCAGFLKGRVDACQ 378

  Fly   209 GDSGGPLVHNGK-----LVALVNWGLPCA-KGYPDAHASISYYHDFIRTHLSL 255
            ||||||||....     |..:|:||..|| ...|..:..::||.|:|.:...|
Mouse   379 GDSGGPLVSEDSKGIWFLAGIVSWGDECALPNKPGVYTRVTYYRDWITSKTGL 431

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5255NP_650604.1 Tryp_SPc 29..249 CDD:214473 78/239 (33%)
Tmprss11cNP_001025468.1 SEA 62..161 CDD:460188
Tryp_SPc 200..428 CDD:238113 79/241 (33%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.