DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5255 and CG16710

DIOPT Version :10

Sequence 1:NP_650604.1 Gene:CG5255 / 42073 FlyBaseID:FBgn0038485 Length:273 Species:Drosophila melanogaster
Sequence 2:NP_651167.3 Gene:CG16710 / 42790 FlyBaseID:FBgn0039101 Length:372 Species:Drosophila melanogaster


Alignment Length:284 Identity:80/284 - (28%)
Similarity:118/284 - (41%) Gaps:66/284 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 SQILYP--PQYTKNRIVGGEEAAAGLAPYQISLQGIGSGAH------------SCGGAIIDERWI 67
            :||..|  |.|   ||.||||.    .|.::....:...||            .|.|::|..|::
  Fly    94 TQICGPIMPAY---RIFGGEET----QPNELPWMALILYAHRSRSVWNERLVSRCAGSLITNRYV 151

  Fly    68 ITAAHCTRGRQATAFRVLTGTQDL--------HQNGSKYYYPDRI-------VEHSNY---APRK 114
            :|||||.|.......||..|..::        |.||.::..|:.:       ::|.:|   ..|.
  Fly   152 LTAAHCLRITGLDLRRVRLGEHNILSNPDCVTHINGREHCAPEHLEIDVDLSIKHRHYMVFEERP 216

  Fly   115 YRNDIALLHLNESIVFDNATQP--VELDHEALVP---GSRLLLTGWGTLSLGGDVPARLQSLEVN 174
            | ||||||.|...:.:....:|  |:||:....|   ..:|.:.|||.....|.....||:. ||
  Fly   217 Y-NDIALLRLKFPVRYTAQIKPICVQLDYIFSNPSFSNHKLQIAGWGLSHKQGYSNVLLQAY-VN 279

  Fly   175 YVPFEQCRAAH-----DNSTRVDIGHVCTFNDKGRGACHGDSGGPL---VHNGK-----LVALVN 226
            ....::|..:.     |..|     |:|..|..|...|.|||||||   :..|.     |..:.:
  Fly   280 GRNADECSLSEPSLGLDKET-----HICAGNLGGNDTCKGDSGGPLMAIMERGDEEFVYLAGITS 339

  Fly   227 WGL-PCAKGYPDAHASISYYHDFI 249
            :|. .|..| |.|:...|.:.::|
  Fly   340 YGYSQCGYG-PAAYTKTSKFVEWI 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5255NP_650604.1 Tryp_SPc 29..249 CDD:214473 74/268 (28%)
CG16710NP_651167.3 CLIP 36..84 CDD:463440
Tryp_SPc 105..362 CDD:214473 74/268 (28%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.