DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5255 and modSP

DIOPT Version :9

Sequence 1:NP_650604.1 Gene:CG5255 / 42073 FlyBaseID:FBgn0038485 Length:273 Species:Drosophila melanogaster
Sequence 2:NP_536776.2 Gene:modSP / 42032 FlyBaseID:FBgn0051217 Length:628 Species:Drosophila melanogaster


Alignment Length:252 Identity:56/252 - (22%)
Similarity:90/252 - (35%) Gaps:79/252 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 CGGAIIDERWIITAAHCT--RGRQA----TAFRVLTGTQDLHQNGSKYY------YPD------R 103
            |||:::....:||||||.  .|.:.    ..|||:         .:|:|      .|:      |
  Fly   399 CGGSLLTPDLVITAAHCVYDEGTRLPYSYDTFRVI---------AAKFYRNYGETTPEEKRRDVR 454

  Fly   104 IVEHSNYAP------RKYRNDIALLHLNESIVFDNATQPVEL------DHEALVPGSRLLLTGWG 156
            ::|   .||      ..|..|:|||.|:|.....:..:|:.:      :.|::....:....||.
  Fly   455 LIE---IAPGYKGRTENYYQDLALLTLDEPFELSHVIRPICVTFASFAEKESVTDDVQGKFAGWN 516

  Fly   157 TLSLGGDVPARLQSLEVNYVPF-----EQCRAAHDNSTRVDIGHVCTFNDKGRGACHGDSGGPLV 216
            ..:          ..|:.:||.     ..||.   |...:.....|.|......||.|||||...
  Fly   517 IEN----------KHELQFVPAVSKSNSVCRR---NLRDIQADKFCIFTQGKSLACQGDSGGGFT 568

  Fly   217 HNGKLVALVNWGLPCAKGY--------PD----AHA-----SISYYHDFIRTHLSLS 256
            ......|...|.  .|:.:        |:    ||:     :|.::.|.|...::.|
  Fly   569 SELPTNAFSTWN--TARHFLFGVISNAPNADQCAHSLTVMTNIQHFEDMILNAMNRS 623

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5255NP_650604.1 Tryp_SPc 29..249 CDD:214473 54/243 (22%)
Tryp_SPc 30..252 CDD:238113 55/246 (22%)
modSPNP_536776.2 LDLa 27..58 CDD:197566
LDLa 70..101 CDD:197566
LDLa 123..157 CDD:197566
LDLa 167..199 CDD:238060
CCP <251..284 CDD:153056
Sushi 309..354 CDD:278512
Tryp_SPc 371..616 CDD:214473 54/243 (22%)
Tryp_SPc 371..591 CDD:304450 49/218 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45468808
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24260
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

Return to query results.
Submit another query.