DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5255 and Tmprss11c

DIOPT Version :10

Sequence 1:NP_650604.1 Gene:CG5255 / 42073 FlyBaseID:FBgn0038485 Length:273 Species:Drosophila melanogaster
Sequence 2:NP_001399454.1 Gene:Tmprss11c / 408213 RGDID:1302967 Length:431 Species:Rattus norvegicus


Alignment Length:248 Identity:79/248 - (31%)
Similarity:118/248 - (47%) Gaps:34/248 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 NRIVGGEEAAAGLAPYQISLQGIGSGAHSCGGAIIDERWIITAAHC-TRGRQATAFRVLTG---T 88
            :::.||::|..|..|:|.|||  .:..|.||..:|...|:|||||| .|......::|..|   :
  Rat   198 HKVAGGQDAEEGEWPWQASLQ--QNNVHRCGATLISNSWLITAAHCFVRSANPKDWKVSFGFLLS 260

  Fly    89 QDLHQNGSKYYYPDRIVEHSNYAPRKYRNDIALLHLNESIVFDN---------ATQPVELDHEAL 144
            :...|...|     .||.|.||:...:.||||::.|:..::::|         |||       ..
  Rat   261 KPQAQRAVK-----SIVIHENYSYPAHNNDIAVVRLSSPVLYENNIRRACLPEATQ-------KF 313

  Fly   145 VPGSRLLLTGWGTLSLGGDVPARLQSLEVNYVPFEQCRAAHDNSTRVDIGHVCTFNDKGR-GACH 208
            .|.|.:::||||||...||.|..||...|..:..:.|.:.......:..|.:|....:|| .||.
  Rat   314 PPNSDVVVTGWGTLKSDGDSPNILQKGRVKIIDNKTCNSGKAYGGVITPGMLCAGFLEGRVDACQ 378

  Fly   209 GDSGGPLVHNGK-----LVALVNWGLPCA-KGYPDAHASISYYHDFIRTHLSL 255
            ||||||||....     |..:|:||..|| ...|..:..:::|.|:|.:...|
  Rat   379 GDSGGPLVSEDSKGIWFLAGIVSWGDECALPNKPGVYTRVTHYRDWISSKTGL 431

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5255NP_650604.1 Tryp_SPc 29..249 CDD:214473 77/239 (32%)
Tmprss11cNP_001399454.1 SEA 62..161 CDD:460188
Tryp_SPc 200..428 CDD:238113 78/241 (32%)
Blue background indicates that the domain is not in the aligned region.

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