DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5255 and LOC3290013

DIOPT Version :10

Sequence 1:NP_650604.1 Gene:CG5255 / 42073 FlyBaseID:FBgn0038485 Length:273 Species:Drosophila melanogaster
Sequence 2:XP_556287.4 Gene:LOC3290013 / 3290013 VectorBaseID:AGAMI1_001965 Length:313 Species:Anopheles gambiae


Alignment Length:255 Identity:69/255 - (27%)
Similarity:113/255 - (44%) Gaps:34/255 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 RIVGGEEAAAGLAPYQIS-LQGIGSGAHSCGGAIIDERWIITAAHCTRGRQATAFRVLTGTQDLH 92
            |||||..|.||..|||:: |..:.:|...|||.::...:::||..|........  |:.|..:| 
Mosquito    69 RIVGGSIATAGQIPYQVAILSDLEAGQALCGGVLLSNNFVLTAGVCVENTSGGV--VVLGALNL- 130

  Fly    93 QNGSK------YYYPDRIVEHSNYAPRKYRNDIALLHLNESIVFDNATQPVELDHEA---LVPGS 148
            ||.::      .:....:..|..:....:||:||.:.|:|.:.|.:..|||.:...|   ...|:
Mosquito   131 QNEAEAGQVRITFAAGDVRLHEEFLAVIFRNNIAAIRLSEPVSFSDRIQPVRIPAAADGRTFAGA 195

  Fly   149 RLLLTGWGTLSLGGDVPARLQSLEVNYV--PF---EQCRAAHDNSTRVDIGHVCTFNDKGRGACH 208
            ...::|:|..|   |.......: :.||  |.   ..|.|...... :|...:|....:.|..|.
Mosquito   196 LATVSGFGRTS---DSSTSFSDV-LRYVRNPIMTNADCFATAWGGL-IDGQKMCLHYMEARAPCD 255

  Fly   209 GDSGGPL-VHNG---KLVALVNWG--LPCAKGYPDAHASISYYHDFIRTHLSLSKTDSSE 262
            ||.|||: |.:|   .||.|.::|  |.|...:|.....|::|..:|     ::.||.::
Mosquito   256 GDVGGPMTVADGGSTLLVGLYSFGSVLGCESDWPAVFVRITFYRQWI-----VANTDVTQ 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5255NP_650604.1 Tryp_SPc 29..249 CDD:214473 66/240 (28%)
LOC3290013XP_556287.4 None

Return to query results.
Submit another query.