DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5255 and Tmprss3

DIOPT Version :10

Sequence 1:NP_650604.1 Gene:CG5255 / 42073 FlyBaseID:FBgn0038485 Length:273 Species:Drosophila melanogaster
Sequence 2:XP_038954650.1 Gene:Tmprss3 / 309665 RGDID:1310135 Length:454 Species:Rattus norvegicus


Alignment Length:256 Identity:82/256 - (32%)
Similarity:121/256 - (47%) Gaps:17/256 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LVLFTSSAASQILYPPQYTKNRIVGGEEAAAGLAPYQISLQGIGSGAHSCGGAIIDERWIITAAH 72
            :.|..|:...:..|.|     |||||..::....|:|:|||  ..|.|.|||::|...||:||||
  Rat   200 VTLKCSACGMRTGYSP-----RIVGGNVSSLTQWPWQVSLQ--FQGYHLCGGSVITPLWIVTAAH 257

  Fly    73 CTRG-RQATAFRVLTGTQDLHQNGSKYYYPDRIVEHSNYAPRKYRNDIALLHLNESIVFDNATQP 136
            |... ....::.|..|...|..:....:..::|:.||.|.|::..|||||:.|:|.:.||...||
  Rat   258 CVYDLYHPKSWTVQVGLVSLMDSPVPSHLVEKIIYHSKYKPKRLGNDIALMKLSEPLTFDETIQP 322

  Fly   137 VEL-DHEALVPGSRLLLT-GWGTLSLG-GDVPARLQSLEVNYVPFEQCRAAHDNSTRVDIGHVCT 198
            :.| :.|...|..:|..| |||....| ||....|....|..:..:.|.........:....:|.
  Rat   323 ICLPNSEENFPDGKLCWTSGWGATEDGAGDASPVLNHAAVPLISNKICNHRDVYGGIISPSMLCA 387

  Fly   199 -FNDKGRGACHGDSGGPLV----HNGKLVALVNWGLPCAK-GYPDAHASISYYHDFIRTHL 253
             :...|..:|.||||||||    ...|||...::|:.||: ..|..:..|:.:.|:|...|
  Rat   388 GYLKGGVDSCQGDSGGPLVCQERRLWKLVGATSFGIGCAEVNKPGVYTRITSFLDWIHEQL 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5255NP_650604.1 Tryp_SPc 29..249 CDD:214473 76/229 (33%)
Tmprss3XP_038954650.1 LDLa 74..107 CDD:238060
SRCR_2 112..211 CDD:464747 2/10 (20%)
Tryp_SPc 216..444 CDD:214473 76/229 (33%)
Blue background indicates that the domain is not in the aligned region.

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