DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5255 and Ovch2

DIOPT Version :10

Sequence 1:NP_650604.1 Gene:CG5255 / 42073 FlyBaseID:FBgn0038485 Length:273 Species:Drosophila melanogaster
Sequence 2:XP_003749007.2 Gene:Ovch2 / 308919 RGDID:1564636 Length:579 Species:Rattus norvegicus


Alignment Length:281 Identity:88/281 - (31%)
Similarity:126/281 - (44%) Gaps:42/281 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 YPPQYTK--NRIVGGEEAAAGLAPYQISLQGIGSGAHSCGGAIIDERWIITAAHCTRGRQ-ATAF 82
            :|..|..  :|||||.:...|..|:|:||:  ....|.|||.||..:|:||||||...|. |...
  Rat    41 WPQNYFSLFSRIVGGSQVEKGSYPWQVSLK--QKQKHICGGTIISSQWVITAAHCMANRNIALTL 103

  Fly    83 RVLTGTQDLHQ--NGSKYYYPDRIVEHSNYAPRKYRN-DIALLHLNESIVFDNATQPVELDHEAL 144
            .|..|..||.|  .|.:....:.|:.|..::.:|..| |||||.:..:..|....:||.|..   
  Rat   104 NVTAGEHDLSQAEPGEQTLAIETIIIHPQFSTKKPMNYDIALLKMVGTFQFGQFVRPVCLPE--- 165

  Fly   145 VPGSRL------LLTGWGTLSLGGDVPARLQSLEVNYVPFEQCRAAHDNSTRVDIG--HVCTFN- 200
             ||.:.      ...|||.||.||.:|..||.:.:..:..|:|.|..........|  .:||.: 
  Rat   166 -PGEQFNAGYICTTAGWGRLSEGGSLPQVLQQVNLPILTHEECEAVMLTLRNPITGKTFLCTGSP 229

  Fly   201 DKGRGACHGDSGGPLV-HNGK----LVALVNWGLPCAKG---------------YPDAHASISYY 245
            |.||.||.|||||.|: .|.|    |..:.:|||.|.:.               :.|....:.:.
  Rat   230 DGGRDACQGDSGGSLMCQNRKGAWTLAGVTSWGLGCGRSWRNNARKKEQGSPGIFTDLRRVLPWI 294

  Fly   246 HDFIRT-HLSLSKTDSSEDIE 265
            |:.::| |...|...|..:::
  Rat   295 HEHVQTGHRRKSTKASCSELD 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5255NP_650604.1 Tryp_SPc 29..249 CDD:214473 82/252 (33%)
Ovch2XP_003749007.2 Tryp_SPc 52..297 CDD:238113 81/250 (32%)
CUB 317..420 CDD:238001
CUB 431..541 CDD:238001
Blue background indicates that the domain is not in the aligned region.

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