DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5255 and Tpsg1

DIOPT Version :10

Sequence 1:NP_650604.1 Gene:CG5255 / 42073 FlyBaseID:FBgn0038485 Length:273 Species:Drosophila melanogaster
Sequence 2:NP_001426649.1 Gene:Tpsg1 / 302990 RGDID:631355 Length:320 Species:Rattus norvegicus


Alignment Length:273 Identity:86/273 - (31%)
Similarity:129/273 - (47%) Gaps:34/273 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LILLPLVLFTSSAASQILYPPQ--YTKNRIVGGEEAAAGLAPYQISLQGIGSGAHSCGGAIIDER 65
            |:||.:...:..|.......||  :..:|||||..|.||..|:|.||:  ....|.|||:::...
  Rat    10 LLLLAVPGISCEALQSGCGQPQVSHAGSRIVGGHAAQAGAWPWQASLR--LQKVHVCGGSLLSPE 72

  Fly    66 WIITAAHCTRGR-QATAFRV----LTGTQDLHQNGSKYYYPDRIVEHSNY-APRKYRNDIALLHL 124
            |::|||||..|. .::.:.|    ||.|...|.:..|     :|:.:|:. .|.....||||:.|
  Rat    73 WVLTAAHCFSGSVNSSDYEVHLGELTITLSPHFSTVK-----QIIMYSSAPGPPGSSGDIALVQL 132

  Fly   125 NESIVFDNATQPVELDHEA--LVPGSRLLLTGWGTLSLGGDV--PARLQSLEVNYVPFEQCRAAH 185
            ...:...:..|||.|...:  ..||.:..:||||....|..:  |..||..:|:.|..|.|..|:
  Rat   133 ATPVALSSQVQPVCLPEASADFHPGMQCWVTGWGYTQEGEPLKPPYNLQEAKVSVVDVETCSQAY 197

  Fly   186 --DNSTRVDIGHVCTFNDKGRG-ACHGDSGGPLVHN----GKLVALVNWGLPCAKGYPD---AHA 240
              .|.:.:....:|.:   |.| ||..|||||||..    .:...:|:||..|  |.||   .:|
  Rat   198 SSSNGSLIQSDMLCAW---GPGDACQDDSGGPLVCRVAGIWQQAGVVSWGEGC--GRPDRPGVYA 257

  Fly   241 SISYYHDFIRTHL 253
            .::.|.::|..|:
  Rat   258 RVTAYVNWIHRHI 270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5255NP_650604.1 Tryp_SPc 29..249 CDD:214473 78/239 (33%)
Tpsg1NP_001426649.1 None

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