DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5255 and Hpn

DIOPT Version :10

Sequence 1:NP_650604.1 Gene:CG5255 / 42073 FlyBaseID:FBgn0038485 Length:273 Species:Drosophila melanogaster
Sequence 2:XP_038958886.1 Gene:Hpn / 29135 RGDID:61982 Length:539 Species:Rattus norvegicus


Alignment Length:244 Identity:75/244 - (30%)
Similarity:113/244 - (46%) Gaps:26/244 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 NRIVGGEEAAAGLAPYQISLQGIGSGAHSCGGAIIDERWIITAAHC--TRGRQATAFRVLTGTQD 90
            :|||||::::.|..|:|:||:  ..|.|.|||:::...|::|||||  .|.|..:.:||..|...
  Rat   202 DRIVGGQDSSLGRWPWQVSLR--YDGTHLCGGSLLSGDWVLTAAHCFPERNRVLSRWRVFAGAVA 264

  Fly    91 LHQNGSKYYYPDRIVEHSNYAPRKYR--------NDIALLHLNESIVFDNATQPVELD--HEALV 145
            .....:.......::.|..|.|  :|        |||||:||:.|:......|||.|.  .:|||
  Rat   265 RTSPHAVQLGVQAVIYHGGYLP--FRDPTIDENSNDIALVHLSSSLPLTEYIQPVCLPAAGQALV 327

  Fly   146 PGSRLLLTGWGTLSLGGDVPARLQSLEVNYVPFEQCRAAHDNSTRVDIGHVCT-FNDKGRGACHG 209
            .|....:||||.....|.....||...|..:..|.|.:......::.....|. :.:.|..||.|
  Rat   328 DGKVCTVTGWGNTQFYGQQAVVLQEARVPIISNEVCNSPDFYGNQIKPKMFCAGYPEGGIDACQG 392

  Fly   210 DSGGPLV--------HNGKLVALVNWGLPCAKG-YPDAHASISYYHDFI 249
            |||||.|        ...:|..:|:||..||.. .|..:..:..:.::|
  Rat   393 DSGGPFVCEDRISGTSRWRLCGIVSWGTGCALARKPGVYTKVIDFREWI 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5255NP_650604.1 Tryp_SPc 29..249 CDD:214473 74/241 (31%)
HpnXP_038958886.1 Hepsin-SRCR 92..200 CDD:462736
Tryp_SPc 204..441 CDD:238113 73/240 (30%)
Blue background indicates that the domain is not in the aligned region.

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