DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5255 and Tmprss11g

DIOPT Version :10

Sequence 1:NP_650604.1 Gene:CG5255 / 42073 FlyBaseID:FBgn0038485 Length:273 Species:Drosophila melanogaster
Sequence 2:NP_001008554.1 Gene:Tmprss11g / 289546 RGDID:1306446 Length:417 Species:Rattus norvegicus


Alignment Length:256 Identity:74/256 - (28%)
Similarity:120/256 - (46%) Gaps:49/256 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 RIVGGEEAAAGLAPYQISLQGIGSGAHSCGGAIIDERWIITAAHC----------------TRGR 77
            ||..|:.|.:...|:|.|||  ..|.|.||.::|..:|::|:|||                |.|.
  Rat   185 RIADGKPAGSNSWPWQSSLQ--VEGIHLCGASLIGSQWLVTSAHCFDNYKNPKLWTVSFGRTLGN 247

  Fly    78 QATAFRVLTGTQDLHQNGSKYYYPDRIVEHSNYAPRKYRNDIALLHLNESIVFDNATQPVELDHE 142
            ..|..:|                 :.|:.|.|||..|:.:|||::.|:..::|....:.|.|...
  Rat   248 PLTTRKV-----------------ESIIIHENYAAHKHDDDIAVVKLSSPVLFSENLRTVCLPEA 295

  Fly   143 A--LVPGSRLLLTGWGTLSLGGDVPARLQSLEVNYVPFEQCRAAHDNSTRVDIGHVCTFNDKGR- 204
            .  ::|.|::.:||||.|...|..|..||.:|:..:..:.|...:.....:..|.:|.....|: 
  Rat   296 TFQVLPKSKVFVTGWGALKANGPFPNSLQEVEIEIISNDVCNQVNVYGGAISSGMICAGFLTGKL 360

  Fly   205 GACHGDSGGPLV-----HNGKLVALVNWGLPCAK-GYPDAHASISYYHDFIRTHLSLSKTD 259
            .||.||||||||     :...|:.:|:||:.|.| ..|..:..:::|.::|:     |||:
  Rat   361 DACEGDSGGPLVISDNRNKWYLLGIVSWGIDCGKENKPGIYTRVTHYRNWIK-----SKTN 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5255NP_650604.1 Tryp_SPc 29..249 CDD:214473 70/244 (29%)
Tmprss11gNP_001008554.1 SEA 48..146 CDD:460188
Tryp_SPc 185..411 CDD:214473 70/244 (29%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.