DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5255 and LOC286960

DIOPT Version :9

Sequence 1:NP_650604.1 Gene:CG5255 / 42073 FlyBaseID:FBgn0038485 Length:273 Species:Drosophila melanogaster
Sequence 2:NP_775423.1 Gene:LOC286960 / 286960 RGDID:708585 Length:247 Species:Rattus norvegicus


Alignment Length:248 Identity:78/248 - (31%)
Similarity:130/248 - (52%) Gaps:17/248 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 VLFTSSAASQILYPPQYTKNRIVGGEEAAAGLAPYQISL-QGIGSGAHSCGGAIIDERWIITAAH 72
            :.|....|:..|  |....::||||......|.|||:|| .||   :|.|||::|.::|:::|||
  Rat     5 IFFAFLGAAVAL--PVNDDDKIVGGYTCPKHLVPYQVSLHDGI---SHQCGGSLISDQWVLSAAH 64

  Fly    73 CTRGRQATAFRVLTGTQDLH--QNGSKYYYPDRIVEHSNYAPRKYRNDIALLHLNESIVFDNATQ 135
            |.:.:    .:|..|..::|  :.|.::...::|:.|..|......|||.|:.|....|.::...
  Rat    65 CYKRK----LQVRLGEHNIHVLEGGEQFIDAEKIIRHPEYNKDTLDNDIMLIKLKSPAVLNSQVS 125

  Fly   136 PVELDHEALVPGSRLLLTGWG-TLSLGGDVPARLQSLEVNYVPFEQCRAAHDNSTRVDIGHVCT- 198
            .|.|........::.|::||| |:|:||..||.||.||...:....|:.::..  ::.....|. 
  Rat   126 TVSLPRSCASTDAQCLVSGWGNTVSIGGKYPALLQCLEAPVLSASSCKKSYPG--QITSNMFCLG 188

  Fly   199 FNDKGRGACHGDSGGPLVHNGKLVALVNWGLPCA-KGYPDAHASISYYHDFIR 250
            |.:.|:.:|.||||||:|.||::..:|:||..|| :|.|..:..:..|..:|:
  Rat   189 FLEGGKDSCDGDSGGPVVCNGEIQGIVSWGSVCAMRGKPGVYTKVCNYLSWIQ 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5255NP_650604.1 Tryp_SPc 29..249 CDD:214473 73/225 (32%)
Tryp_SPc 30..252 CDD:238113 74/227 (33%)
LOC286960NP_775423.1 Tryp_SPc 23..240 CDD:214473 73/225 (32%)
Tryp_SPc 24..243 CDD:238113 74/227 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D469244at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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