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Protein Alignment CG5255 and F7

DIOPT Version :10

Sequence 1:	NP_650604.1	Gene:	CG5255 / 42073	FlyBaseID:	FBgn0038485	Length:	273	Species:	Drosophila melanogaster
Sequence 2:	NP_690059.1	Gene:	F7 / 260320	RGDID:	628678	Length:	446	Species:	Rattus norvegicus

Alignment Length:	273	Identity:	81/273 - (29%)
Similarity:	121/273 - (44%)	Gaps:	48/273 - (17%)

- Green bases have known domain annotations that are detailed below.

  Fly    14 SAASQILYP--------------PQYTKNRIVGGEEAAAGLAPYQISLQGIGSGAHSCGGAIIDE 64
            |...::.||              ||   .|||||.....|..|:|..|:  .:.|..||..::|.
  Rat   167 SCKPKVEYPCGRIPVVEKRNFSRPQ---GRIVGGYVCPKGECPWQAVLK--FNEALLCGAVLLDT 226

  Fly    65 RWIITAAHC-TRGRQATAFRVLTGTQDL-HQNGSKYYYPDRIVEHSNYAPRKYR-----NDIALL 122
            |||:||||| .:..:.....|:.|..|. .:.|::..   |:||.. ..|.||.     :||||:
  Rat   227 RWIVTAAHCFDKFGKLVNITVVLGEHDFSEKEGTEQV---RLVEQV-IMPNKYTRGRTDHDIALV 287

  Fly   123 HLNESIVFDNATQPVELDHEAL-------VPGSRLLLTGWGTLSLGGDVPARLQSLEVNYVPFEQ 180
            .|:..:.|.:...|:.|...|.       :..||  ::|||.|...|.....|..:||..:..:.
  Rat   288 RLHRPVTFTDYVVPLCLPERAFSENTLASIRFSR--VSGWGQLLDRGATALELMVIEVPRLMTQD 350

  Fly   181 C--RAAHD-NSTRVDIGHVCT-FNDKGRGACHGDSGGPLV--HNGK--LVALVNWGLPCAK-GYP 236
            |  .|.|. |:.|:.....|. :.|..:.||.||||||..  ::|.  |..:|:||..||. |:.
  Rat   351 CLEHAKHSANTPRITENMFCAGYMDGTKDACKGDSGGPHATHYHGTWYLTGVVSWGEGCAAIGHI 415

  Fly   237 DAHASISYYHDFI 249
            ..:..:|.|.|::
  Rat   416 GVYTRVSQYIDWL 428

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.