DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5255 and Klkb1

DIOPT Version :10

Sequence 1:NP_650604.1 Gene:CG5255 / 42073 FlyBaseID:FBgn0038485 Length:273 Species:Drosophila melanogaster
Sequence 2:NP_032481.2 Gene:Klkb1 / 16621 MGIID:102849 Length:638 Species:Mus musculus


Alignment Length:247 Identity:85/247 - (34%)
Similarity:125/247 - (50%) Gaps:20/247 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 RIVGGEEAAAGLAPYQISLQ-GIGSGAHSCGGAIIDERWIITAAHCTRG-RQATAFRVLTGTQDL 91
            |||||..|:.|..|:|:||| .:.|..|.|||:||..:|::|||||..| .....:|:..|...|
Mouse   390 RIVGGTNASLGEWPWQVSLQVKLVSQTHLCGGSIIGRQWVLTAAHCFDGIPYPDVWRIYGGILSL 454

  Fly    92 HQNGSKYYYPDRIVE---HSNYAPRKYRNDIALLHLNESIVFDNATQPVELDHEALVPG--SRLL 151
            .:. :|.....||.|   |..|...:...||||:.|...:.:....:|:.|..:|....  :...
Mouse   455 SEI-TKETPSSRIKELIIHQEYKVSEGNYDIALIKLQTPLNYTEFQKPICLPSKADTNTIYTNCW 518

  Fly   152 LTGWGTLSLGGDVPARLQSLEVNYVPFEQCRAAHDNSTRVDIGHVCT-FNDKGRGACHGDSGGPL 215
            :||||.....|:....||...:..||.|:|:..:.:.. ::...:|. :.:.|..||.|||||||
Mouse   519 VTGWGYTKEQGETQNILQKATIPLVPNEECQKKYRDYV-INKQMICAGYKEGGTDACKGDSGGPL 582

  Fly   216 V--HNGK--LVALVNWGLPCA-KGYPDAHASISYYHDFIRTHLSLSKTDSSE 262
            |  |:|:  ||.:.:||..|| |..|..:..:|.|.|:|     |.||.||:
Mouse   583 VCKHSGRWQLVGITSWGEGCARKDQPGVYTKVSEYMDWI-----LEKTQSSD 629

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5255NP_650604.1 Tryp_SPc 29..249 CDD:214473 79/232 (34%)
Klkb1NP_032481.2 APPLE 21..104 CDD:128519
APPLE 111..194 CDD:128519
APPLE 201..284 CDD:128519
APPLE 292..375 CDD:128519
Tryp_SPc 391..621 CDD:238113 78/231 (34%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.