DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5255 and Tmprss2

DIOPT Version :10

Sequence 1:NP_650604.1 Gene:CG5255 / 42073 FlyBaseID:FBgn0038485 Length:273 Species:Drosophila melanogaster
Sequence 2:XP_008766769.1 Gene:Tmprss2 / 156435 RGDID:620766 Length:580 Species:Rattus norvegicus


Alignment Length:242 Identity:79/242 - (32%)
Similarity:120/242 - (49%) Gaps:29/242 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 KNRIVGGEEAAAGLAPYQISL--QGIGSGAHSCGGAIIDERWIITAAHC-----TRGRQATAFRV 84
            ::|||||..|:.|..|:|:||  |||    |.|||:||...||:|||||     :..|..|||..
  Rat   251 QSRIVGGSTASPGDWPWQVSLHVQGI----HVCGGSIITPEWIVTAAHCVEEPLSSPRYWTAFAG 311

  Fly    85 LTGTQDLHQNGSKYYYPDRIVEHSNYAPRKYRNDIALLHLNESIVFDNATQPVELDHEALVPGSR 149
            :. .|.|...||::.. ::::.|.||..:...|||||:.|...:.|::..:||.|.:    ||..
  Rat   312 IL-KQSLMFYGSRHQV-EKVISHPNYDSKTKNNDIALMKLQTPLAFNDVVKPVCLPN----PGMM 370

  Fly   150 L------LLTGWGTLSLGGDVPARLQSLEVNYVPFEQCRAAHDNSTRVDIGHVCT-FNDKGRGAC 207
            |      .::|||.....|.....|.:..|..:...:|.:.:..:..:....:|. |......:|
  Rat   371 LDLAQECWISGWGATYEKGKTSDVLNAAMVPLIEPSKCNSKYIYNNLITPAMICAGFLQGSVDSC 435

  Fly   208 HGDSGGPLVHNGK----LVALVNWGLPCAKGY-PDAHASISYYHDFI 249
            .||||||||....    |:...:||..|||.| |..:.:::.:.|:|
  Rat   436 QGDSGGPLVTLKNEIWWLIGDTSWGSGCAKAYRPGVYGNVTVFTDWI 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5255NP_650604.1 Tryp_SPc 29..249 CDD:214473 78/238 (33%)
Tmprss2XP_008766769.1 LDLa 112..147 CDD:238060
SRCR_2 152..247 CDD:464747
Tryp_SPc 254..485 CDD:238113 78/239 (33%)
Blue background indicates that the domain is not in the aligned region.

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