DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5255 and Hpn

DIOPT Version :10

Sequence 1:NP_650604.1 Gene:CG5255 / 42073 FlyBaseID:FBgn0038485 Length:273 Species:Drosophila melanogaster
Sequence 2:NP_001263198.1 Gene:Hpn / 15451 MGIID:1196620 Length:445 Species:Mus musculus


Alignment Length:255 Identity:78/255 - (30%)
Similarity:118/255 - (46%) Gaps:30/255 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 NRIVGGEEAAAGLAPYQISLQGIGSGAHSCGGAIIDERWIITAAHC--TRGRQATAFRVLTGTQD 90
            :|||||::::.|..|:|:||:  ..|.|.|||:::...|::|||||  .|.|..:.:||..|...
Mouse   189 DRIVGGQDSSLGRWPWQVSLR--YDGTHLCGGSLLSGDWVLTAAHCFPERNRVLSRWRVFAGAVA 251

  Fly    91 LHQNGSKYYYPDRIVEHSNYAPRKYR--------NDIALLHLNESIVFDNATQPVELD--HEALV 145
            .....:.......::.|..|.|  :|        |||||:||:.|:......|||.|.  .:|||
Mouse   252 RTSPHAVQLGVQAVIYHGGYLP--FRDPTIDENSNDIALVHLSSSLPLTEYIQPVCLPAAGQALV 314

  Fly   146 PGSRLLLTGWGTLSLGGDVPARLQSLEVNYVPFEQCRAAHDNSTRVDIGHVCT-FNDKGRGACHG 209
            .|....:||||.....|.....||...|..:..|.|.:......::.....|. :.:.|..||.|
Mouse   315 DGKVCTVTGWGNTQFYGQQAMVLQEARVPIISNEVCNSPDFYGNQIKPKMFCAGYPEGGIDACQG 379

  Fly   210 DSGGPLV--------HNGKLVALVNWGLPCAKG-YPDAHASISYYHDF----IRTHLSLS 256
            |||||.|        ...:|..:|:||..||.. .|..:..::.:.::    |:||...|
Mouse   380 DSGGPFVCEDSISGTSRWRLCGIVSWGTGCALARKPGVYTKVTDFREWIFKAIKTHSEAS 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5255NP_650604.1 Tryp_SPc 29..249 CDD:214473 74/245 (30%)
HpnNP_001263198.1 Hepsin-SRCR 79..187 CDD:462736
Tryp_SPc 191..428 CDD:238113 73/240 (30%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.