DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5255 and ovch2

DIOPT Version :10

Sequence 1:NP_650604.1 Gene:CG5255 / 42073 FlyBaseID:FBgn0038485 Length:273 Species:Drosophila melanogaster
Sequence 2:XP_031756362.1 Gene:ovch2 / 100496902 XenbaseID:XB-GENE-955935 Length:1023 Species:Xenopus tropicalis


Alignment Length:279 Identity:82/279 - (29%)
Similarity:130/279 - (46%) Gaps:45/279 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 NRIVGGEEAAAGLAPYQISLQGIGSGAHSCGGAIIDERWIITAAHCTRGRQATAF-RVLTGTQD- 90
            :|||||.|:..|..|:.:||:  .:|.|.|||.::..|.::||:||...|...:: ||..|..| 
 Frog    62 SRIVGGRESKKGQHPWTVSLK--RNGKHFCGGILVSRRHVLTASHCLLDRNVKSYIRVFFGEYDQ 124

  Fly    91 -LHQNGSKYYYPDRIVEHS--NYA-PRKYRNDIALLHLNESIVFDNATQPVELDH--EALVPGSR 149
             :.::..:.:....|.:|.  ||. |..|  |:|:|.|:.::.||:..||..:.:  :...||..
 Frog   125 TIKEDTEQTFKVIEIFKHPDFNYTQPMNY--DVAVLVLDGAVTFDDNIQPACMPNPDDVFEPGDL 187

  Fly   150 LLLTGWGTLSLGGDVPARLQSLEVNYVPFEQC-------RAAHDNSTRVDIGHVCTFNDKGRGAC 207
            .:..|||.|:..|.:|..||.:.:..|....|       :.|..:|..|..|    |.:.|:.||
 Frog   188 CVTLGWGHLTENGILPGVLQEVLLPLVNLSICLDVMATLKGAVVSSKIVCAG----FPEGGKDAC 248

  Fly   208 HGDSGGPLV---HNGKLV--ALVNWGLPCA-------------KGYPDAHASISYYHDFIRTHLS 254
            .|||||||:   .:|..|  .|.:||:.|.             ||.|.....|.....::...|:
 Frog   249 QGDSGGPLLCQRRHGTWVLHGLTSWGMGCGRSWKNNMFLPANRKGSPGIFTDIQKLLGWVSFQLN 313

  Fly   255 LSKTDSSEDIEEEMIALQD 273
            .:.|..|    :|..::||
 Frog   314 TAVTKES----KESCSVQD 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5255NP_650604.1 Tryp_SPc 29..249 CDD:214473 76/252 (30%)
ovch2XP_031756362.1 Tryp_SPc 64..309 CDD:238113 75/252 (30%)
CUB 330..436 CDD:238001
CUB 447..558 CDD:238001
Tryp_SPc 606..832 CDD:238113
CUB 888..1000 CDD:238001
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.