DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5255 and tmprss6

DIOPT Version :10

Sequence 1:NP_650604.1 Gene:CG5255 / 42073 FlyBaseID:FBgn0038485 Length:273 Species:Drosophila melanogaster
Sequence 2:XP_004913946.2 Gene:tmprss6 / 100489045 XenbaseID:XB-GENE-1011573 Length:806 Species:Xenopus tropicalis


Alignment Length:224 Identity:71/224 - (31%)
Similarity:105/224 - (46%) Gaps:24/224 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 RIVGGEEAAAGLAPYQISLQGIGSGAHSCGGAIIDERWIITAAHCTRGRQATAFRVLT---GTQD 90
            |:|||.:|..|..|:|.|||  ..|.|.|||.::.::||:|||||.......:..|.|   |...
 Frog   570 RLVGGTQAQEGEWPWQASLQ--VRGEHICGGTLVADQWILTAAHCFTPESYASPEVWTVYLGKVR 632

  Fly    91 LHQNGSK--YYYPDRIVEHSNYAPRKYRNDIALLHLNESIVFDNA-TQPVELDHEA--LVPGSRL 150
            |.::..|  .:...|:|.|..|....:..|:||:.|:..:...:. .||:.|....  ...||..
 Frog   633 LSRSTQKELAFKVIRLVIHPFYDEDSHDYDVALVLLDHLVPLTSPHVQPICLPSSTHHFPTGSSC 697

  Fly   151 LLTGWGTLSLGGDVPARLQSLEVNYVPFEQCRAAHDNSTRVDIG--HVCT-FNDKGRGACHGDSG 212
            .:||||::...|.....||.:::..|..:.|...:    |..|.  .:|. :.|..:.||.||||
 Frog   698 WVTGWGSVKENGPTSDVLQKVDIQLVAQDICTELY----RYQISPRMLCAGYRDGSKDACQGDSG 758

  Fly   213 GPLV---HNGK--LVALVNWGLPCAKGYP 236
            .|||   .:|:  ...||:||..|  |.|
 Frog   759 SPLVCKTASGRWFQAGLVSWGAGC--GIP 785

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5255NP_650604.1 Tryp_SPc 29..249 CDD:214473 71/224 (32%)
tmprss6XP_004913946.2 SEA 77..174 CDD:460188
CUB 235..303 CDD:412131
LDLa 448..478 CDD:238060
LDLa 480..514 CDD:238060
LDLa 525..560 CDD:238060
Tryp_SPc 572..804 CDD:238113 70/222 (32%)
Blue background indicates that the domain is not in the aligned region.

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