DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5246 and Plg

DIOPT Version :10

Sequence 1:NP_650603.1 Gene:CG5246 / 42072 FlyBaseID:FBgn0038484 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_445943.1 Gene:Plg / 85253 RGDID:619893 Length:812 Species:Rattus norvegicus


Alignment Length:251 Identity:85/251 - (33%)
Similarity:132/251 - (52%) Gaps:35/251 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 VKPET---RVIGG-VDSPTGFAPYQVSIMNTF-GEHVCGGSIIAPQWILTAAHCMEWPI--QYLK 93
            |:|:.   ||:|| |.:|..: |:|:|:...| |:|.|||::|:|:|:||||||:|...  ::.|
  Rat   573 VEPKKCPGRVVGGCVANPHSW-PWQISLRTRFSGQHFCGGTLISPEWVLTAAHCLEKSSRPEFYK 636

  Fly    94 IVTGTVDYTRPGAE-YLVDGSKIHCSHDKPAYHNDIALIHTAKPIVYDDLTQPIKLASKGSLPKV 157
            ::.|..:....|:: ..:..:|:....:..    ||||:..::|....|...|..|.|...:  |
  Rat   637 VILGAHEERILGSDVQQIAVTKLVLEPNDA----DIALLKLSRPATITDNVIPACLPSPNYV--V 695

  Fly   158 GDKLT--LTGWGSTK-TWGRYSTQLQKIDLNYIDHDNC------QSRVRNANWLSEGHVCTFTQE 213
            .|:..  :||||.|| |.|  :.:|::..|..|::..|      .:||::.. |..||:.    .
  Rat   696 ADRTLCYITGWGETKGTPG--AGRLKEAQLPVIENKVCNRAEYLNNRVKSTE-LCAGHLA----G 753

  Fly   214 GEGSCHGDSGGPLV---DANQTLVGVVNWGEACA-IGYPDVFGSVAYYHDWIEQMM 265
            |..||.||||||||   .....|.||.:||..|| ...|.|:..|:.|.:|||:.|
  Rat   754 GIDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCARPNKPGVYVRVSRYVNWIEREM 809

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5246NP_650603.1 Tryp_SPc 42..263 CDD:238113 80/238 (34%)
PlgNP_445943.1 PAN_AP_HGF 33..97 CDD:238532
KR 101..183 CDD:214527
KR 183..262 CDD:214527
KR 273..354 CDD:214527
KR 374..456 CDD:214527
KR 480..562 CDD:214527
Tryp_SPc 582..807 CDD:238113 80/238 (34%)
Blue background indicates that the domain is not in the aligned region.

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