DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5246 and st14b

DIOPT Version :10

Sequence 1:NP_650603.1 Gene:CG5246 / 42072 FlyBaseID:FBgn0038484 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_001429317.1 Gene:st14b / 777629 ZFINID:ZDB-GENE-061103-613 Length:864 Species:Danio rerio


Alignment Length:252 Identity:77/252 - (30%)
Similarity:119/252 - (47%) Gaps:32/252 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 KP--ETRVIGGVDSPTGFAPYQVSI-MNTFGEHVCGGSIIAPQWILTAAHCM------------E 86
            ||  .:|::||.||..|..|:|||: |.|.| ||||.|:|:..|::|||||:            :
Zfish   618 KPHKSSRIVGGKDSDEGEWPWQVSLHMKTQG-HVCGASVISNSWLVTAAHCVQDNDQFRYSQADQ 681

  Fly    87 WPIQYLKIVT--GTVDYTRPGAEYLVDGSKIHCSHDKPAYHNDIALIHTAKPIVYDDLTQPIKLA 149
            |.: ||.:..  .|...|:.....::.    |..:|..:|.|||||:....|:..:....||.|.
Zfish   682 WEV-YLGLHNQGETSKSTQRSVLRIIP----HPQYDHSSYDNDIALMELDSPVTLNQNIWPICLP 741

  Fly   150 SKGSLPKVGDKLTLTGWGSTKTWG-RYSTQLQKIDLNYIDHDNCQSRVRNANWLSEGHVCT-FTQ 212
            ........|..:.:||||..:... ...:.|||.::..|:...|...:.:.  ::...:|. ...
Zfish   742 DPTHYFPAGKSVWITGWGKLREGSDAVPSVLQKAEVRIINSTVCSKLMDDG--ITPHMICAGVLS 804

  Fly   213 EGEGSCHGDSGGPL--VDAN--QTLVGVVNWGEACA-IGYPDVFGSVAYYHDWIEQM 264
            .|..:|.||||||:  ::.|  ..|.|||:||:.|. ...|.|:..|..|..||.::
Zfish   805 GGVDACQGDSGGPMSSIEGNGRMFLAGVVSWGDGCGRRNRPGVYTRVTDYRSWIREI 861

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5246NP_650603.1 Tryp_SPc 42..263 CDD:238113 74/242 (31%)
st14bNP_001429317.1 None

Return to query results.
Submit another query.