DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5246 and Ctrb1

DIOPT Version :10

Sequence 1:NP_650603.1 Gene:CG5246 / 42072 FlyBaseID:FBgn0038484 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_079859.2 Gene:Ctrb1 / 66473 MGIID:88559 Length:263 Species:Mus musculus


Alignment Length:246 Identity:75/246 - (30%)
Similarity:117/246 - (47%) Gaps:37/246 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 TRVIGGVDSPTGFAPYQVSIMNTFGEHVCGGSIIAPQWILTAAHCMEWPIQYLKIVTGTVDYTRP 104
            :|::.|.|:..|..|:|||:.:..|.|.||||:|:..|::|||||   .::...:|... ::.:.
Mouse    32 SRIVNGEDAIPGSWPWQVSLQDRTGFHFCGGSLISENWVVTAAHC---GVKTTDVVVAG-EFDQG 92

  Fly   105 GAEYLVDGSKIHCSHDKPAYH-----NDIALIHTAKPIVYDDLTQPIKLASKGSLPKVGDKL--- 161
            ..|..|...||......|.::     |||.|:..|.|..:.:....:      .||.|.|..   
Mouse    93 SDEENVQVLKIAQVFKNPKFNSFTVRNDITLLKLATPAQFSETVSAV------CLPTVDDDFPAG 151

  Fly   162 TL---TGWGSTKTWGRYST--QLQKIDLNYIDHDNCQSRVRNANW---LSEGHVCTFTQEGEGSC 218
            ||   ||||.|| :....|  :||:..|..:....|:.     :|   :::..:|. ...|..||
Mouse   152 TLCATTGWGKTK-YNALKTPDKLQQAALPIVSEAKCKE-----SWGSKITDVMICA-GASGVSSC 209

  Fly   219 HGDSGGPLV---DANQTLVGVVNWGEA-CAIGYPDVFGSVAYYHDWIEQMM 265
            .||||||||   |...||.|:|:||.. |:...|.|:..|.....|:::::
Mouse   210 MGDSGGPLVCQKDGVWTLAGIVSWGSGFCSTSTPAVYARVTALMPWVQEIL 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5246NP_650603.1 Tryp_SPc 42..263 CDD:238113 74/240 (31%)
Ctrb1NP_079859.2 Tryp_SPc 34..259 CDD:238113 74/241 (31%)

Return to query results.
Submit another query.