DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5246 and Tmprss11d

DIOPT Version :10

Sequence 1:NP_650603.1 Gene:CG5246 / 42072 FlyBaseID:FBgn0038484 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_001028824.2 Gene:Tmprss11d / 64565 RGDID:620654 Length:417 Species:Rattus norvegicus


Alignment Length:270 Identity:78/270 - (28%)
Similarity:120/270 - (44%) Gaps:40/270 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 VILSQCSAKSVKIHRRHQLNHHLGHVKPETRVIGGVDSPTGFAPYQVSI-MNTFGEHVCGGSIIA 74
            |:..:|.|:...|            ...|.|:|||..:.||..|:|||: :|..  |.|||::|:
  Rat   167 VLTQECGARPDLI------------TLSEERIIGGTQAETGDWPWQVSLQLNNV--HHCGGTLIS 217

  Fly    75 PQWILTAAHC-------MEWPIQYLKIVTGTVDYTRPGAEYLVDGSKIHCSHDKPAYHNDIALIH 132
            ..|:||||||       .:|      ..|..|....|.....|.....|..::.....||||::.
  Rat   218 NLWVLTAAHCFRSYSNPQQW------TATFGVSTISPRLRVRVRAILAHAEYNSITRDNDIAVVQ 276

  Fly   133 TAKPIVYDDLTQPIKL--ASKGSLPKVGDKLT-LTGWGSTKTWGRYSTQLQKIDLNYIDHDNCQS 194
            ..:|:.:......:.|  |::..:|   |.:. :|||||....|...|.||:.::..:..:.|..
  Rat   277 LDRPVTFTRNIHRVCLPAATQNIIP---DSVAYVTGWGSLTYGGNTVTNLQQGEVRIVSSEVCNE 338

  Fly   195 RVRNANWLSEGHVCTFTQEGE-GSCHGDSGGPLVDANQT----LVGVVNWGEACAI-GYPDVFGS 253
            .......:..|.:|...:.|. .:|.||||||||..:..    :||:|:||..|.: ..|.|:..
  Rat   339 PAGYGGSVLPGMLCAGVRSGAVDACQGDSGGPLVQEDTRRLWFVVGIVSWGYQCGLPNKPGVYTR 403

  Fly   254 VAYYHDWIEQ 263
            |..|.:||.|
  Rat   404 VTAYRNWIRQ 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5246NP_650603.1 Tryp_SPc 42..263 CDD:238113 71/237 (30%)
Tmprss11dNP_001028824.2 SEA 48..140 CDD:460188
Tryp_SPc 186..414 CDD:238113 72/239 (30%)
Blue background indicates that the domain is not in the aligned region.

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