DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5246 and CG17239

DIOPT Version :9

Sequence 1:NP_650603.1 Gene:CG5246 / 42072 FlyBaseID:FBgn0038484 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_001259920.1 Gene:CG17239 / 59224 FlyBaseID:FBgn0042186 Length:248 Species:Drosophila melanogaster


Alignment Length:227 Identity:69/227 - (30%)
Similarity:115/227 - (50%) Gaps:13/227 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 PETRVIGGVDSPTGFAPYQVSIMNTFGEHVCGGSIIAPQWILTAAHCM-EWPIQYLKIVTGTVDY 101
            || |::||........|:|.||:. .|...||.:|.:...::|||||: :...::|.:..|: .:
  Fly    21 PE-RIVGGDLITILSVPWQASILR-LGRFHCGAAIYSEDIVITAAHCLTDRETEFLSVRVGS-SF 82

  Fly   102 TRPGAEYL-VDGSKIHCSHDKPAYHNDIALIHTAKPIVYDDLTQPIKLASKGSLPKVGDKLTLTG 165
            |..|.:.: |....:|..:|: ::.||||::.....:........|.||.  :.|..|...|::|
  Fly    83 TFFGGQVVRVSSVLLHEEYDQ-SWSNDIAVMRLQSKLRLGSAVSVIPLAD--TPPASGSPATVSG 144

  Fly   166 WGSTKTWGRYSTQLQKIDLNYIDHDNCQSRVRNANWLSEGHVCTFTQEGEGSCHGDSGGPLVDAN 230
            ||:......|...:....::.:|.|.|  |......:::..:|. ...|:.:|.||||||||..|
  Fly   145 WGAIGFKKNYPMSILSASVDIVDQDQC--RRSYGRKITKDMICA-AAPGKDACSGDSGGPLVSGN 206

  Fly   231 QTLVGVVNWGEACA-IGYPDVFGSVAYYHDWI 261
            : |||:|::|:.|| ..||.|:.:||....||
  Fly   207 K-LVGIVSFGKECAHPEYPGVYANVAELKPWI 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5246NP_650603.1 Tryp_SPc 41..261 CDD:214473 65/222 (29%)
Tryp_SPc 42..263 CDD:238113 66/223 (30%)
CG17239NP_001259920.1 Tryp_SPc 23..237 CDD:214473 65/222 (29%)
Tryp_SPc 24..237 CDD:238113 64/221 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D469244at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.920

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