DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5246 and LOC5667666

DIOPT Version :10

Sequence 1:NP_650603.1 Gene:CG5246 / 42072 FlyBaseID:FBgn0038484 Length:272 Species:Drosophila melanogaster
Sequence 2:XP_001689376.3 Gene:LOC5667666 / 5667666 VectorBaseID:AGAMI1_003505 Length:253 Species:Anopheles gambiae


Alignment Length:252 Identity:65/252 - (25%)
Similarity:124/252 - (49%) Gaps:30/252 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 VKPETRVIGGVDSPTGFAPYQVSIMNTFGEHVCGGSIIAPQWILTAAHCM--EWPIQYLKIVTGT 98
            |:...|:.||:::....||:|:| :..|..|:||.|::.....:|||||:  :.|.:::.::.|:
Mosquito    11 VRVTGRIFGGMETNIKDAPHQLS-LRRFDSHICGASVVDASLAITAAHCLTPKPPPEFITLMGGS 74

  Fly    99 VDYTRPGAEYLVDGSK--IHCSHDKPAYHNDIALIHTAKPIVYDDLTQPIKLASKGSLPKVGDKL 161
            .:.|......:.:..:  ||..::...:|||:||:.........:...||.|.::.......:.:
Mosquito    75 TNRTDYDVGVIFNAIELIIHPGYNSNTFHNDVALVRIEGTFGGYENVAPIPLRTRTIFTSSSNPV 139

  Fly   162 --TLTGWGSTKTWGRYSTQLQKI-DLNYIDHDNCQSRVRNANW----LSEGHVCTFTQEGE---G 216
              |::|||.|...|....::.:| .:..:.:..|:.:     |    ::...:|.    ||   .
Mosquito   140 YCTVSGWGLTNMNGDGLPEILRIVRIPLVPYTECRRK-----WNPFPITSSMICA----GELRKD 195

  Fly   217 SCHGDSGGPLVDANQTLVGVVNWG-EACAIGYPDVFGSV----AYYHDWIEQMMTDA 268
            :|:|||||||| .|..|.|:|:|| ..|...||.::.|:    ::..:::..|..||
Mosquito   196 ACNGDSGGPLV-CNGQLYGIVSWGSNQCGSSYPGIYTSIPAVLSFLSEYMSPMQFDA 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5246NP_650603.1 Tryp_SPc 42..263 CDD:238113 60/239 (25%)
LOC5667666XP_001689376.3 None

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