DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5246 and LOC558805

DIOPT Version :10

Sequence 1:NP_650603.1 Gene:CG5246 / 42072 FlyBaseID:FBgn0038484 Length:272 Species:Drosophila melanogaster
Sequence 2:XP_021329158.1 Gene:LOC558805 / 558805 -ID:- Length:255 Species:Danio rerio


Alignment Length:231 Identity:69/231 - (29%)
Similarity:106/231 - (45%) Gaps:12/231 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 VIGGVDSPTGFAPYQVSIMNTFGEHVCGGSIIAPQWILTAAHCMEWPIQYLKIVTGTVDYTRPGA 106
            :|.|..:......|..|:... |||.|||.:|.|.::||||||.:.  ..:.::.||.|.:..|.
Zfish    26 IINGKKAKKSSLLYMASVQIN-GEHKCGGFLIDPSYVLTAAHCNKQ--GNMSVILGTHDISPKGT 87

  Fly   107 ---EYLVDGSKIHCSHDKPAYHNDIALIHTAKPIVYDDLTQPIKLASKGSLPKVGDKLTLTGWGS 168
               .|.|....||.|:.......||.|:...|.:......:.:.:.||....|...|..:.|||.
Zfish    88 NVKRYRVQNKHIHPSYKSVKTGKDIMLLKLYKKVKIGKDVKLVTIPSKDKPLKPKSKCLVAGWGK 152

  Fly   169 TKTWGRYSTQLQKIDLNYIDHDNCQSRVRNAN-WLSEGHVCTFTQEGE-GSCHGDSGGPLVDANQ 231
            |:. ......|...|:..|:...|||..:..| .|.:..:|....|.: |:|.||||||||.:.|
Zfish   153 TEK-DNTVNDLLVTDVLTINKTVCQSVWKKINVELPDNILCAGGYETKSGACQGDSGGPLVCSGQ 216

  Fly   232 TLVGVV--NWGEACAIGYPDVFGSVAYYHDWIEQMM 265
            . ||:|  |.|.......|:::..::.|..||::::
Zfish   217 A-VGIVSFNMGRCDYPNTPNIYTQISKYTHWIKKVI 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5246NP_650603.1 Tryp_SPc 42..263 CDD:238113 69/227 (30%)
LOC558805XP_021329158.1 Tryp_SPc 26..250 CDD:238113 69/228 (30%)

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