DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5246 and st14

DIOPT Version :10

Sequence 1:NP_650603.1 Gene:CG5246 / 42072 FlyBaseID:FBgn0038484 Length:272 Species:Drosophila melanogaster
Sequence 2:XP_685356.5 Gene:st14 / 557248 ZFINID:ZDB-GENE-140106-74 Length:841 Species:Danio rerio


Alignment Length:253 Identity:74/253 - (29%)
Similarity:120/253 - (47%) Gaps:45/253 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 RVIGGVDSPTGFAPYQVSIMNTFGEHVCGGSIIAPQWILTAAHCMEWPIQYLKIVTGTVDYTRPG 105
            |::||.::..|..|:|||:......|.||.|||:.:|:|.||||...|....|:.:..:.|:   
Zfish   602 RIVGGQNADVGEWPWQVSLHFKTQGHACGASIISNKWLLCAAHCFIQPDPSYKMTSSWITYS--- 663

  Fly   106 AEYLVDGSKIHCSHDK-------------PAYHN-----DIALIHTAKPIVYDDLTQPIKLASKG 152
                  |.:...:|||             |.|::     ||:|:..::|:.:.:...||.|.:..
Zfish   664 ------GLRDQNTHDKSVQMRDLKTIITHPNYNDLTNDYDISLLELSQPLNFSNTVHPICLPATS 722

  Fly   153 SLPKVGDKLTLTGWGSTKTWGRYSTQLQKIDLNYIDHDNCQSRVRNANWLSEGHV-----CT-FT 211
            .:...|....:||||:.:..|..:..|||.::..|:...|       |.::||.|     |: :.
Zfish   723 HVFTAGSSCFVTGWGTLREGGSAAQILQKAEVKVINDTVC-------NMVTEGQVTSRMMCSGYL 780

  Fly   212 QEGEGSCHGDSGGPLVDANQ----TLVGVVNWGEACA-IGYPDVFGSVAYYHDWIEQM 264
            ..|..:|.||||||||..::    ...|:|:|||.|| ...|.|:..|....:||.::
Zfish   781 SGGVDACQGDSGGPLVCLSEGGKWFQAGIVSWGEGCARRNKPGVYTRVTKLREWIREI 838

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5246NP_650603.1 Tryp_SPc 42..263 CDD:238113 73/249 (29%)
st14XP_685356.5 SEA 78..175 CDD:460188
CUB 208..322 CDD:238001
CUB 331..437 CDD:238001
LDLa 445..477 CDD:238060
LDLa 479..513 CDD:238060
LDLa 515..549 CDD:238060
LDLa 556..591 CDD:238060
Tryp_SPc 603..838 CDD:238113 73/250 (29%)
Blue background indicates that the domain is not in the aligned region.

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