DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5246 and PLG

DIOPT Version :10

Sequence 1:NP_650603.1 Gene:CG5246 / 42072 FlyBaseID:FBgn0038484 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_000292.1 Gene:PLG / 5340 HGNCID:9071 Length:810 Species:Homo sapiens


Alignment Length:268 Identity:88/268 - (32%)
Similarity:128/268 - (47%) Gaps:36/268 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 QCSAKSVKIHRRHQLNHHLGHVKPET---RVIGGVDSPTGFAPYQVSIMNTFGEHVCGGSIIAPQ 76
            ||:|.|....:        ..|:|:.   ||:||..:.....|:|||:...||.|.|||::|:|:
Human   559 QCAAPSFDCGK--------PQVEPKKCPGRVVGGCVAHPHSWPWQVSLRTRFGMHFCGGTLISPE 615

  Fly    77 WILTAAHCME---WPIQYLKIVTGTVDYTRPGAEYLVDGSKIHCSHDKPAYHNDIALIHTAKPIV 138
            |:||||||:|   .|..| |::.|.  :.....|..|...::.....:|. ..||||:..:.|.|
Human   616 WVLTAAHCLEKSPRPSSY-KVILGA--HQEVNLEPHVQEIEVSRLFLEPT-RKDIALLKLSSPAV 676

  Fly   139 YDDLTQPIKLASKGSLPKVGDKLTLTGWGSTK-TWGRYSTQLQKIDLNYIDHDNC------QSRV 196
            ..|...|..|.|...:.....:..:||||.|: |:|  :..|::..|..|::..|      ..||
Human   677 ITDKVIPACLPSPNYVVADRTECFITGWGETQGTFG--AGLLKEAQLPVIENKVCNRYEFLNGRV 739

  Fly   197 RNANWLSEGHVCTFTQEGEGSCHGDSGGPLV---DANQTLVGVVNWGEACA-IGYPDVFGSVAYY 257
            ::.. |..||:.    .|..||.||||||||   .....|.||.:||..|| ...|.|:..|:.:
Human   740 QSTE-LCAGHLA----GGTDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCARPNKPGVYVRVSRF 799

  Fly   258 HDWIEQMM 265
            ..|||.:|
Human   800 VTWIEGVM 807

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CG5246NP_650603.1 Tryp_SPc 42..263 CDD:238113 79/234 (34%)
PLGNP_000292.1 PAN_AP_HGF <38..97 CDD:238532
KR 101..183 CDD:214527
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 126..145
KR 183..263 CDD:214527
KR 273..354 CDD:214527
KR 375..456 CDD:214527
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 396..416