DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5246 and Tmprss2

DIOPT Version :10

Sequence 1:NP_650603.1 Gene:CG5246 / 42072 FlyBaseID:FBgn0038484 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_056590.2 Gene:Tmprss2 / 50528 MGIID:1354381 Length:490 Species:Mus musculus


Alignment Length:271 Identity:89/271 - (32%)
Similarity:141/271 - (52%) Gaps:28/271 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 VLISVLVILSQCSAKSVKIHRRHQLNHHLGHVKPETRVIGGVDSPTGFAPYQVSIMNTFGEHVCG 69
            :::|:..|  :|..:|               ||.::|::||:::..|..|:||| ::..|.||||
Mouse   234 MVVSLRCI--ECGVRS---------------VKRQSRIVGGLNASPGDWPWQVS-LHVQGVHVCG 280

  Fly    70 GSIIAPQWILTAAHCMEWPIQYLKIVTGTVDYTRP-----GAEYLVDGSKIHCSHDKPAYHNDIA 129
            ||||.|:||:|||||:|.|:...:..|......|.     |:.:.|:....|.::|....:||||
Mouse   281 GSIITPEWIVTAAHCVEEPLSSPRYWTAFAGILRQSLMFYGSRHQVEKVISHPNYDSKTKNNDIA 345

  Fly   130 LIHTAKPIVYDDLTQPIKLASKGSLPKVGDKLTLTGWGSTKTWGRYSTQLQKIDLNYIDHDNCQS 194
            |:....|:.::||.:|:.|.:.|.:..:..:..::|||:|...|:.|..|....:..|:...|.|
Mouse   346 LMKLQTPLAFNDLVKPVCLPNPGMMLDLDQECWISGWGATYEKGKTSDVLNAAMVPLIEPSKCNS 410

  Fly   195 RVRNANWLSEGHVCT-FTQEGEGSCHGDSGGPLVDANQ---TLVGVVNWGEACAIGY-PDVFGSV 254
            :....|.::...:|. |.|....||.||||||||....   .|:|..:||..||... |.|:|:|
Mouse   411 KYIYNNLITPAMICAGFLQGSVDSCQGDSGGPLVTLKNGIWWLIGDTSWGSGCAKALRPGVYGNV 475

  Fly   255 AYYHDWIEQMM 265
            ..:.|||.|.|
Mouse   476 TVFTDWIYQQM 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5246NP_650603.1 Tryp_SPc 42..263 CDD:238113 80/230 (35%)
Tmprss2NP_056590.2 LDLa 112..147 CDD:238060
SRCR_2 152..247 CDD:464747 3/14 (21%)
Tryp_SPc 254..485 CDD:238113 80/231 (35%)
Blue background indicates that the domain is not in the aligned region.

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