DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5246 and Prss44

DIOPT Version :10

Sequence 1:NP_650603.1 Gene:CG5246 / 42072 FlyBaseID:FBgn0038484 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_001388157.1 Gene:Prss44 / 501060 RGDID:1560940 Length:373 Species:Rattus norvegicus


Alignment Length:247 Identity:86/247 - (34%)
Similarity:137/247 - (55%) Gaps:17/247 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 GHVKPETRVIGGVDSPTGFAPYQVSIMNTFGEHVCGGSIIAPQWILTAAHCMEWPIQYLKIVTGT 98
            ||  ...|::||..:|....|:||| :....:|:||||:|:..|::|||||:...:.|: :..|.
  Rat   107 GH--RTARIVGGKPAPIRKWPWQVS-LQVHKQHICGGSLISKWWVMTAAHCVYGHLDYV-VSMGE 167

  Fly    99 VD-YTRPGAEYLVDGSKIHCSHD--KPAYHNDIALIHTAKPIVYDDLTQPIKLASKGSLPKVGDK 160
            .| ::....:..|....:|..:.  :...| ||||:..|.|:.|....||:.:..|..|.:.|..
  Rat   168 ADLWSSMSVKIPVQDIIVHQDYSVMRTIVH-DIALVLLAFPVNYSVNIQPVCIPEKSFLVQPGTL 231

  Fly   161 LTLTGWGSTKTWGRYSTQLQKIDLNYIDHDNCQSRVRNA-----NWLSEGHVCTFTQEGEGSCHG 220
            ..:||||.|...||.|..|:::||:.|.|:.|...:::.     ..:.||.||.:.::|..:|.|
  Rat   232 CWVTGWGKTIERGRSSRVLREVDLSIIRHERCNQILKDITGRIFTLVQEGGVCGYNKKGGDACQG 296

  Fly   221 DSGGPLV-DANQT--LVGVVNWGEACA-IGYPDVFGSVAYYHDWIEQMMTDA 268
            |||||:| :.|:|  .||:|:||..|. ||||.::..|:||.|||.:.::.|
  Rat   297 DSGGPMVCEFNKTWVQVGIVSWGLGCGRIGYPGIYTEVSYYRDWIIKELSRA 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5246NP_650603.1 Tryp_SPc 42..263 CDD:238113 82/232 (35%)
Prss44NP_001388157.1 Tryp_SPc 113..341 CDD:238113 80/230 (35%)

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