DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5246 and prtn3

DIOPT Version :9

Sequence 1:NP_650603.1 Gene:CG5246 / 42072 FlyBaseID:FBgn0038484 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_001006847.1 Gene:prtn3 / 448597 XenbaseID:XB-GENE-5805214 Length:245 Species:Xenopus tropicalis


Alignment Length:263 Identity:73/263 - (27%)
Similarity:118/263 - (44%) Gaps:36/263 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 VLVILSQCSAKSVKIHRRHQLNHHLGHVKPETRVIGGVDSPTGFAPYQVSIMNTFGEHVCGGSII 73
            :||.||...|..|.....|            |:::||.::.....|| ::.:...|.|.||||:|
 Frog     5 LLVTLSILWASQVNGGSMH------------TQIVGGREATPNSHPY-IASLQLRGRHFCGGSLI 56

  Fly    74 APQWILTAAHCMEWPIQYL-KIVTGTVDYTRPGAEYLVDGSKIHCSHDKP----AYHNDIALIHT 133
            |||:::|||||||.....| .:|.|.  ::....|......:::...:..    ...|||.::..
 Frog    57 APQFLMTAAHCMENTASNLVTVVLGA--HSLRANEATKQRFRVNQVFENGFNPLTLQNDIVILKL 119

  Fly   134 AKPIVYDDLTQPIKLASKGSLPKVGDKLTLTGWGSTKTWGRYSTQLQKIDLNYIDHDNCQSRVRN 198
            .:|:..:...|.:.|.|.......|.:....|||...|.|:...:||::::.          |..
 Frog   120 DRPVSLNGKVQVVSLPSANEDVPAGTQCVTAGWGRLSTEGQIPDRLQELNVT----------VTR 174

  Fly   199 ANWLSEGHVCT--FTQEGEGSCHGDSGGPLVDANQTLVGVVNW-GEACAIGY-PDVFGSVAYYHD 259
            .|.....::||  |.|:. |.|.|||||||| .|..:.|:.:: ..:|..|. ||.|..|:.:..
 Frog   175 QNLCRPNNICTGVFMQQA-GICFGDSGGPLV-CNGVIQGITSFIIRSCGNGVTPDFFSRVSLFRR 237

  Fly   260 WIE 262
            :|:
 Frog   238 FID 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5246NP_650603.1 Tryp_SPc 41..261 CDD:214473 64/228 (28%)
Tryp_SPc 42..263 CDD:238113 65/230 (28%)
prtn3NP_001006847.1 Tryp_SPc 26..241 CDD:238113 65/230 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D469244at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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