DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5246 and prtn3

DIOPT Version :10

Sequence 1:NP_650603.1 Gene:CG5246 / 42072 FlyBaseID:FBgn0038484 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_001006847.1 Gene:prtn3 / 448597 XenbaseID:XB-GENE-5805214 Length:245 Species:Xenopus tropicalis


Alignment Length:263 Identity:73/263 - (27%)
Similarity:118/263 - (44%) Gaps:36/263 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 VLVILSQCSAKSVKIHRRHQLNHHLGHVKPETRVIGGVDSPTGFAPYQVSIMNTFGEHVCGGSII 73
            :||.||...|..|.....|            |:::||.::.....|| ::.:...|.|.||||:|
 Frog     5 LLVTLSILWASQVNGGSMH------------TQIVGGREATPNSHPY-IASLQLRGRHFCGGSLI 56

  Fly    74 APQWILTAAHCMEWPIQYL-KIVTGTVDYTRPGAEYLVDGSKIHCSHDKP----AYHNDIALIHT 133
            |||:::|||||||.....| .:|.|.  ::....|......:::...:..    ...|||.::..
 Frog    57 APQFLMTAAHCMENTASNLVTVVLGA--HSLRANEATKQRFRVNQVFENGFNPLTLQNDIVILKL 119

  Fly   134 AKPIVYDDLTQPIKLASKGSLPKVGDKLTLTGWGSTKTWGRYSTQLQKIDLNYIDHDNCQSRVRN 198
            .:|:..:...|.:.|.|.......|.:....|||...|.|:...:||::::.          |..
 Frog   120 DRPVSLNGKVQVVSLPSANEDVPAGTQCVTAGWGRLSTEGQIPDRLQELNVT----------VTR 174

  Fly   199 ANWLSEGHVCT--FTQEGEGSCHGDSGGPLVDANQTLVGVVNW-GEACAIGY-PDVFGSVAYYHD 259
            .|.....::||  |.|:. |.|.|||||||| .|..:.|:.:: ..:|..|. ||.|..|:.:..
 Frog   175 QNLCRPNNICTGVFMQQA-GICFGDSGGPLV-CNGVIQGITSFIIRSCGNGVTPDFFSRVSLFRR 237

  Fly   260 WIE 262
            :|:
 Frog   238 FID 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5246NP_650603.1 Tryp_SPc 42..263 CDD:238113 65/230 (28%)
prtn3NP_001006847.1 Tryp_SPc 26..241 CDD:238113 65/230 (28%)

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