DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5246 and CG11841

DIOPT Version :10

Sequence 1:NP_650603.1 Gene:CG5246 / 42072 FlyBaseID:FBgn0038484 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_651661.1 Gene:CG11841 / 43430 FlyBaseID:FBgn0039628 Length:319 Species:Drosophila melanogaster


Alignment Length:218 Identity:55/218 - (25%)
Similarity:99/218 - (45%) Gaps:31/218 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 CGGSIIAPQWILTAAHCM---EWPIQYLKIVTGTVDYTRPGAE---YLVDGSKIHCSHDKPAYHN 126
            |||::|:.:.:||||||.   ...:..:::.....|.....||   :.|...|.|...:.|..:|
  Fly   102 CGGTLISNRLVLTAAHCFFSEHGEVNVVRLGELEFDTDTDDAEPEDFGVLALKAHPGFENPQLYN 166

  Fly   127 DIALIHTAKPIVYDDLTQPIKLASKGSLP----KVGDKLTLTGWGSTKTWGRYSTQLQKIDL-NY 186
            ||.::...:.:.::....|      ..||    :..:.....|||..|...:.|.:|.|:.| .|
  Fly   167 DIGIVQLDREVKFNRYKHP------ACLPFDDGEQHESFIAIGWGQKKFAQKESKKLLKVQLQGY 225

  Fly   187 IDHDNCQSRVRNANWLSEGH-----VCTFTQEGEGSCHGDSGGPLVDANQTL------VGVVNWG 240
              .|.|.|.|...:.|..|:     :|..:::.:.:|:||||||::..::.|      :|:.:.|
  Fly   226 --KDRCVSSVDANDELPNGYEPKSQLCIGSRDNKDTCNGDSGGPVLAYHKDLACMYHVMGITSAG 288

  Fly   241 EACAI-GYPDVFGSVAYYHDWIE 262
            ..|:. ..|..:..|.|:.:||:
  Fly   289 ITCSTPDIPSAYTRVHYFLNWIK 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5246NP_650603.1 Tryp_SPc 42..263 CDD:238113 55/218 (25%)
CG11841NP_651661.1 Tryp_SPc 72..311 CDD:238113 54/216 (25%)

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