DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5246 and CG5909

DIOPT Version :10

Sequence 1:NP_650603.1 Gene:CG5246 / 42072 FlyBaseID:FBgn0038484 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_651544.1 Gene:CG5909 / 43274 FlyBaseID:FBgn0039495 Length:381 Species:Drosophila melanogaster


Alignment Length:259 Identity:64/259 - (24%)
Similarity:108/259 - (41%) Gaps:37/259 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 KPETRVIGGVDSPTGFAP------YQVSIMNTFGEHVCGGSIIAPQWILTAAHCMEWPIQYLKIV 95
            |...:|.||..:..|..|      |:::....|.   ||||:|:.:.|||||||:....:.:.:.
  Fly   125 KGNPKVSGGKTARPGDFPWVALLKYKINDPRPFR---CGGSLISERHILTAAHCIIDQPEVIAVR 186

  Fly    96 TGTVDYTR----------------PGAEYLVDGSKIHCSHDKPAYHNDIALIHTAKPIVYDDLTQ 144
            .|..|...                |..||.::..::|.::......:|:|:|...:.:......:
  Fly   187 LGEHDLESEEDCHYLGGTNRVCIPPYEEYGIEQIRVHPNYVHGKISHDVAIIKLDRVVKEKSHIK 251

  Fly   145 PIKLA--SKGSLPKVGDKLTLTGWGSTKTWGRYSTQLQKIDLNYIDHDNCQSRVRNANWLSEGHV 207
            |:.|.  .|...........:.|||.|:. ...:|:||:..:.....:.|: :..|...:|:.|:
  Fly   252 PVCLPIDQKSQELDFDQSFFVAGWGGTEK-ETVATKLQQALITRKSLNECR-QYYNKGEVSDNHI 314

  Fly   208 CTFTQEGEGSCHGDSGGPLVDANQ-------TLVGVVNW-GEACAIGYPDVFGSVAYYHDWIEQ 263
            |......:.:|.||||||:...::       ...|||:: |..|....|.||.||.....||.|
  Fly   315 CATGTGIKHTCQGDSGGPVFFKHRFKNTYRVVQYGVVSFGGRLCGQNQPGVFASVIDMLPWITQ 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5246NP_650603.1 Tryp_SPc 42..263 CDD:238113 62/252 (25%)
CG5909NP_651544.1 CLIP 25..82 CDD:197829
Tryp_SPc 132..379 CDD:238113 62/252 (25%)
Blue background indicates that the domain is not in the aligned region.

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