DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5246 and CG11836

DIOPT Version :10

Sequence 1:NP_650603.1 Gene:CG5246 / 42072 FlyBaseID:FBgn0038484 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_001356925.1 Gene:CG11836 / 43007 FlyBaseID:FBgn0039272 Length:333 Species:Drosophila melanogaster


Alignment Length:247 Identity:72/247 - (29%)
Similarity:120/247 - (48%) Gaps:30/247 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 GHVKPETRVIGGVDSPTGF--APYQVSIMNTFGEHVCGGSIIAPQWILTAAHCM-EWPIQYLKIV 95
            |....|.|::||  .|||.  .|:...|:.. |:..||||::...::|:||||: :.....::::
  Fly    89 GFSNEEIRIVGG--KPTGVNQYPWMARIVYD-GKFHCGGSLLTKDYVLSAAHCVKKLRKSKIRVI 150

  Fly    96 TGTVDYTRPGAEYLVDGSKI---------HCSHDKPAYHNDIALIHTAKPIVYDDLTQPIKLASK 151
            .|..|     .|...:...|         |.|.|...|:|||||:...|||.:..:.:||.|...
  Fly   151 FGDHD-----QEITSESQAIQRAVTAVIKHKSFDPDTYNNDIALLRLRKPISFSKIIKPICLPRY 210

  Fly   152 GSLP--KVGDKLTLTGWGSTKTWGRYSTQLQKIDLNYIDHDNCQSRVRNANWLSEGHVCTFTQEG 214
            ...|  ::|   |:.|||.|...|...:.:.::.:..:....|:::...:..::...:|. .:..
  Fly   211 NYDPAGRIG---TVVGWGRTSEGGELPSIVNQVKVPIMSITECRNQRYKSTRITSSMLCA-GRPS 271

  Fly   215 EGSCHGDSGGPLVDANQT---LVGVVNWGEACA-IGYPDVFGSVAYYHDWIE 262
            ..||.|||||||:.:|..   :||:|:||..|. .|||.|:..|:.:..||:
  Fly   272 MDSCQGDSGGPLLLSNGVKYFIVGIVSWGVGCGREGYPGVYSRVSKFIPWIK 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5246NP_650603.1 Tryp_SPc 42..263 CDD:238113 69/239 (29%)
CG11836NP_001356925.1 Tryp_SPc 97..325 CDD:238113 69/239 (29%)

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