DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5246 and Sb

DIOPT Version :10

Sequence 1:NP_650603.1 Gene:CG5246 / 42072 FlyBaseID:FBgn0038484 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_476709.1 Gene:Sb / 41958 FlyBaseID:FBgn0003319 Length:787 Species:Drosophila melanogaster


Alignment Length:265 Identity:84/265 - (31%)
Similarity:126/265 - (47%) Gaps:37/265 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 LGHVK----------------PETRVIGGVDSPTGFAPYQVSIMNT--FG---EHVCGGSIIAPQ 76
            |||||                ||||::||..:..|..|:|||:..|  ||   .|.|||::|...
  Fly   519 LGHVKTISAARSECGVPTLARPETRIVGGKSAAFGRWPWQVSVRRTSFFGFSSTHRCGGALINEN 583

  Fly    77 WILTAAHCM-EWPIQYLKIVTGTVDYTR-----PGAEYLVDGSKIHCSHDKPAYHNDIALIHTAK 135
            ||.||.||: :..|..::|..|..|::.     |..|..|....:|..:....|..|:||:...:
  Fly   584 WIATAGHCVDDLLISQIRIRVGEYDFSHVQEQLPYIERGVAKKVVHPKYSFLTYEYDLALVKLEQ 648

  Fly   136 PIVYDDLTQPIKLASKGSLPKVGDKLTLTGWGSTKTWGRYSTQLQKIDLNYIDHDNCQS---RVR 197
            |:.:.....||.|....|| .:|...|:||||.....|...:.||::.:..:.:|||:|   |..
  Fly   649 PLEFAPHVSPICLPETDSL-LIGMNATVTGWGRLSEGGTLPSVLQEVSVPIVSNDNCKSMFMRAG 712

  Fly   198 NANWLSEGHVCT-FTQEGEGSCHGDSGGPLVDANQT----LVGVVNWGEACA-IGYPDVFGSVAY 256
            ...::.:..:|. :...|:.||.|||||||...:|.    |.|:::||..|| ...|.|...::.
  Fly   713 RQEFIPDIFLCAGYETGGQDSCQGDSGGPLQAKSQDGRFFLAGIISWGIGCAEANLPGVCTRISK 777

  Fly   257 YHDWI 261
            :..||
  Fly   778 FTPWI 782

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5246NP_650603.1 Tryp_SPc 42..263 CDD:238113 75/240 (31%)
SbNP_476709.1 Tryp_SPc 544..785 CDD:238113 75/240 (31%)

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