DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5246 and CG8870

DIOPT Version :10

Sequence 1:NP_650603.1 Gene:CG5246 / 42072 FlyBaseID:FBgn0038484 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_731802.1 Gene:CG8870 / 41645 FlyBaseID:FBgn0038144 Length:356 Species:Drosophila melanogaster


Alignment Length:229 Identity:64/229 - (27%)
Similarity:97/229 - (42%) Gaps:35/229 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 CGGSIIAPQWILTAAHCMEWP-IQY---LK----------------IVTGTVDYTRPGAEYLVDG 112
            ||||:|...::||||||:|:| :.|   ||                ||.|...|.....|..||.
  Fly   117 CGGSLINNWYVLTAAHCVEYPFMDYPYALKTVRLGEHNTSTNPDRAIVNGRRQYAPLYMEIEVDQ 181

  Fly   113 SKIHCSHDK-PAYHNDIALIHTAKPIVYDDLTQPIKLASKGSLPKVGDKLTLTGWGSTKTWGRYS 176
            ...|...:: ....|||||:....|:.|....|||.|.....|.....|...:||..... |..|
  Fly   182 IITHEQFNRGRRLINDIALVRLKFPVRYTRAIQPICLPRAQKLAAHKRKFQASGWPDMGQ-GIAS 245

  Fly   177 TQLQKIDLNYIDHDNCQSRVRNANWLSEGHVCTFTQEGEGSCHGDSGGPLVD----ANQTL---V 234
            ..|.:..:.....|.|:|   |.::.....:|....:|..:..|||||||::    ...||   .
  Fly   246 EVLLRSFIAERHPDVCKS---NYDFNLGSQICAGGLDGNDTSPGDSGGPLMETVIRGKVTLTYAA 307

  Fly   235 GVVNWGE-ACAIG--YPDVFGSVAYYHDWIEQMM 265
            |::::|: .|.:.  .|..:...:|:.:||:..:
  Fly   308 GIISYGQKPCVLKTCKPAFYTKTSYFFEWIKSKL 341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5246NP_650603.1 Tryp_SPc 42..263 CDD:238113 64/225 (28%)
CG8870NP_731802.1 Tryp_SPc 93..340 CDD:238113 64/226 (28%)

Return to query results.
Submit another query.