DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5246 and snk

DIOPT Version :10

Sequence 1:NP_650603.1 Gene:CG5246 / 42072 FlyBaseID:FBgn0038484 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster


Alignment Length:257 Identity:68/257 - (26%)
Similarity:117/257 - (45%) Gaps:46/257 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 VIGGVDSPTGFAPYQVSIMNTFG--------EHVCGGSIIAPQWILTAAHCMEWPIQYLKIVTGT 98
            ::||..:..|..|:..::..|.|        :..|||::::..::||||||         ..:|:
  Fly   186 IVGGTPTRHGLFPHMAALGWTQGSGSKDQDIKWGCGGALVSELYVLTAAHC---------ATSGS 241

  Fly    99 --VDYTRPGAEYLVDGSK-----------IHCSHDKPAYHNDIALIHTAKPIVYDDLTQPIKLAS 150
              .|..|.||..|.:.|.           :|..:...||::||||:...:.:.:.:..:|   |.
  Fly   242 KPPDMVRLGARQLNETSATQQDIKILIIVLHPKYRSSAYYHDIALLKLTRRVKFSEQVRP---AC 303

  Fly   151 KGSLPKVG-DKLTLTGWGSTKTWGRYSTQLQKIDLNYIDHDNCQSRVRNANWLS----EGHVCT- 209
            ...||::. ..:...|||.|:..|..|..|:::||:.:....|:...|....|.    ||..|. 
  Fly   304 LWQLPELQIPTVVAAGWGRTEFLGAKSNALRQVDLDVVPQMTCKQIYRKERRLPRGIIEGQFCAG 368

  Fly   210 FTQEGEGSCHGDSGGPL------VDANQTLVGVVNWGEACAI-GYPDVFGSVAYYHDWIEQM 264
            :...|..:|.||||||:      .:....:||:.::|:.||. ..|.|:..:..|.||||::
  Fly   369 YLPGGRDTCQGDSGGPIHALLPEYNCVAFVVGITSFGKFCAAPNAPGVYTRLYSYLDWIEKI 430

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5246NP_650603.1 Tryp_SPc 42..263 CDD:238113 67/254 (26%)
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 68/255 (27%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.