DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5246 and CG13318

DIOPT Version :10

Sequence 1:NP_650603.1 Gene:CG5246 / 42072 FlyBaseID:FBgn0038484 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_649831.1 Gene:CG13318 / 41048 FlyBaseID:FBgn0037627 Length:405 Species:Drosophila melanogaster


Alignment Length:281 Identity:74/281 - (26%)
Similarity:124/281 - (44%) Gaps:42/281 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 ILSQCSAKSVKIHRRHQLNHHLGHVKPETRVIGGVDSPTGFAPYQVSIMNTFGEHVCGGSIIAPQ 76
            :::.|.|.|.:..||..       ..|.:.......:..|..|:|.:::.|...::.||::|..|
  Fly   140 LVACCQAGSYQCGRRFP-------PPPGSTTAAPGQASFGAYPWQAALLTTADVYLGGGALITAQ 197

  Fly    77 WILTAAH-CMEWPIQYLKIVTGTVDYTR-----PGAEYLVDGSKIHCSHDKPAYHNDIALIHTAK 135
            .:||||| .....:.|.|:..|..|...     |..:..:....::.|.:.....||:|::    
  Fly   198 HVLTAAHKVYNLGLTYFKVRLGEWDAASTSEPIPAQDVYISNVYVNPSFNPNNLQNDVAIL---- 258

  Fly   136 PIVYDDLTQPIKLASKGS-----LPK---VGDKLTLTGWGSTK--TWGRYSTQLQKIDLNYIDHD 190
                 .|:.|:.|.||.:     ||.   ||.:..:.|||...  ..|.|....:::|:..|.:.
  Fly   259 -----KLSTPVSLTSKSTVGTVCLPTTSFVGQRCWVAGWGKNDFGATGAYQAIERQVDVPLIPNA 318

  Fly   191 NCQ-----SRVRNANWLS-EGHVCTFTQEGEGSCHGDSGGPLVDANQ---TLVGVVNWGEACA-I 245
            |||     :|:.::..|| ...:|...:.|:.:|.||.|.|||..:.   .:||:|.||..|| .
  Fly   319 NCQAALQATRLGSSFVLSPTSFICAGGEAGKDACTGDGGSPLVCTSNGVWYVVGLVAWGIGCAQA 383

  Fly   246 GYPDVFGSVAYYHDWIEQMMT 266
            |.|.|:.:|..|..||:..:|
  Fly   384 GVPGVYVNVGTYLPWIQTTLT 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5246NP_650603.1 Tryp_SPc 42..263 CDD:238113 67/246 (27%)
CG13318NP_649831.1 CLIP_1 <91..145 CDD:465709 0/4 (0%)
Tryp_SPc 169..402 CDD:238113 67/241 (28%)

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