DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5246 and Tmprss11c

DIOPT Version :10

Sequence 1:NP_650603.1 Gene:CG5246 / 42072 FlyBaseID:FBgn0038484 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_001399454.1 Gene:Tmprss11c / 408213 RGDID:1302967 Length:431 Species:Rattus norvegicus


Alignment Length:247 Identity:77/247 - (31%)
Similarity:125/247 - (50%) Gaps:37/247 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 GHVKPETRVIGGVDSPTGFAPYQVSIMNTFGEHVCGGSIIAPQWILTAAHCM-------EWPIQY 91
            ||     :|.||.|:..|..|:|.|:... ..|.||.::|:..|::|||||.       :|.:.:
  Rat   197 GH-----KVAGGQDAEEGEWPWQASLQQN-NVHRCGATLISNSWLITAAHCFVRSANPKDWKVSF 255

  Fly    92 LKIVTGTVDYTRPGAEYLVDGSKIHCSHDKPAYHNDIALIHTAKPIVYDDLTQPIKLASKGSLPK 156
            ..::      ::|.|:..|....||.::..||::||||::..:.|::|::..:      :..||:
  Rat   256 GFLL------SKPQAQRAVKSIVIHENYSYPAHNNDIAVVRLSSPVLYENNIR------RACLPE 308

  Fly   157 VGDK------LTLTGWGSTKTWGRYSTQLQKIDLNYIDHDNCQSRVRNANWLSEGHVCTFTQEGE 215
            ...|      :.:||||:.|:.|.....|||..:..||:..|.|.......::.|.:|....||.
  Rat   309 ATQKFPPNSDVVVTGWGTLKSDGDSPNILQKGRVKIIDNKTCNSGKAYGGVITPGMLCAGFLEGR 373

  Fly   216 -GSCHGDSGGPLVDANQT----LVGVVNWGEACAI-GYPDVFGSVAYYHDWI 261
             .:|.||||||||..:..    |.|:|:||:.||: ..|.|:..|.:|.|||
  Rat   374 VDACQGDSGGPLVSEDSKGIWFLAGIVSWGDECALPNKPGVYTRVTHYRDWI 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5246NP_650603.1 Tryp_SPc 42..263 CDD:238113 75/239 (31%)
Tmprss11cNP_001399454.1 SEA 62..161 CDD:460188
Tryp_SPc 200..428 CDD:238113 75/239 (31%)
Blue background indicates that the domain is not in the aligned region.

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