DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5246 and LPA

DIOPT Version :10

Sequence 1:NP_650603.1 Gene:CG5246 / 42072 FlyBaseID:FBgn0038484 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_005568.2 Gene:LPA / 4018 HGNCID:6667 Length:2040 Species:Homo sapiens


Alignment Length:244 Identity:79/244 - (32%)
Similarity:118/244 - (48%) Gaps:29/244 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 KPETR-------VIGGVDSPTGFAPYQVSIMNTFGEHVCGGSIIAPQWILTAAHCME---WPIQY 91
            ||:..       ::||..:.....|:|||:...||:|.|||::|:|:|:||||||::   .|..|
Human  1808 KPQVEPKKCPGSIVGGCVAHPHSWPWQVSLRTRFGKHFCGGTLISPEWVLTAAHCLKKSSRPSSY 1872

  Fly    92 LKIVTGTVDYTRPGAEYLVDGSKIHCSHDKPAYHNDIALIHTAKPIVYDDLTQPIKLASKGSLPK 156
             |::.|.  :.....|..|...::.....:|. ..||||:..::|.|..|...|..|.|...:..
Human  1873 -KVILGA--HQEVNLESHVQEIEVSRLFLEPT-QADIALLKLSRPAVITDKVMPACLPSPDYMVT 1933

  Fly   157 VGDKLTLTGWGSTKTWGRYSTQLQK-IDLNYIDHDNCQSRVRNANWLSEGHVCTFTQEGEGSCHG 220
            ...:..:||||.|:  |.:.|.|.| ..|..|:::.|    .:..::...|:.    .|..||.|
Human  1934 ARTECYITGWGETQ--GTFGTGLLKEAQLLVIENEVC----NHYKYICAEHLA----RGTDSCQG 1988

  Fly   221 DSGGPLV---DANQTLVGVVNWGEACA-IGYPDVFGSVAYYHDWIEQMM 265
            |||||||   .....|.||.:||..|| ...|.|:..|:.:..|||.||
Human  1989 DSGGPLVCFEKDKYILQGVTSWGLGCARPNKPGVYARVSRFVTWIEGMM 2037

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5246NP_650603.1 Tryp_SPc 42..263 CDD:238113 74/228 (32%)
LPANP_005568.2 Kringle 28..105 CDD:395005
Kringle 142..219 CDD:395005
Kringle 256..333 CDD:395005
Kringle 370..447 CDD:395005
Kringle 484..561 CDD:395005
Kringle 598..675 CDD:395005
Kringle 712..789 CDD:395005
Kringle 826..903 CDD:395005
KR 938..1019 CDD:214527
Kringle 1054..1131 CDD:395005
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1147..1166
KR 1166..1246 CDD:214527
KR 1272..1352 CDD:214527
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1365..1388
KR 1386..1466 CDD:214527
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1476..1497
KR 1500..1581 CDD:214527
KR 1614..1695 CDD:214527
Kringle 1720..1799 CDD:395005
Tryp_SPc 1820..2034 CDD:238113 73/227 (32%)
Blue background indicates that the domain is not in the aligned region.

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