DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5246 and CG6865

DIOPT Version :10

Sequence 1:NP_650603.1 Gene:CG5246 / 42072 FlyBaseID:FBgn0038484 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_001246825.1 Gene:CG6865 / 40050 FlyBaseID:FBgn0036817 Length:285 Species:Drosophila melanogaster


Alignment Length:309 Identity:86/309 - (27%)
Similarity:137/309 - (44%) Gaps:73/309 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKCLVLISVLVIL----SQ-------CSAKSVKIHRRHQLNHHLGHVKPETRVIGGVDSPTGFAP 54
            :|.:.:::||.::    ||       ||.::.||                   :||.::.....|
  Fly     2 LKIVFVVAVLSLVKCAQSQIAFSNQPCSVRNPKI-------------------VGGSEAERNEMP 47

  Fly    55 YQVSIMNTFGEHVCGGSIIAPQWILTAAHCMEWPIQYLKIVTGTVDYTRPG-----------AEY 108
            |.||:|.. |.|.|||:||:.:|||||.||         |..|...:.:|.           .||
  Fly    48 YMVSLMRR-GGHFCGGTIISERWILTAGHC---------ICNGLQQFMKPAQIQGVVGLHSIREY 102

  Fly   109 L-----------VDGSKI--HCSHDKPAYHNDIALIHTAKPIVYDDLTQPIKLAS-KGSLPKVGD 159
            |           ||...|  |..:|.....:||||:...:||.:....||..:.| :|......:
  Fly   103 LNGIGNGPDALRVDFKNIVPHPQYDCNDVKHDIALLELVQPIRFSSHIQPSCVGSEEGHRSLEQE 167

  Fly   160 KLTLTGWGST---KTWGRYSTQLQKIDLNYIDHDNCQSRVRN---ANWLSEGHVCTFTQEGE-GS 217
            ..|::|||.|   :.....|..|:|..:...:::.|:...|:   :|.:.|..:|...:.|: .|
  Fly   168 YGTVSGWGWTHENQAENDRSDVLRKATVKIWNNEACERSYRSLGKSNTIGETQLCAGYENGQIDS 232

  Fly   218 CHGDSGGPLVDANQTLVGVVNWGEACA-IGYPDVFGSVAYYHDWIEQMM 265
            |..||||||:.....|||||:.|..|| .|.|.::..|:.|..|:::::
  Fly   233 CWADSGGPLMSKEHHLVGVVSTGIGCARPGLPGIYTRVSKYVSWMQKVI 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5246NP_650603.1 Tryp_SPc 42..263 CDD:238113 77/253 (30%)
CG6865NP_001246825.1 Tryp_SPc 34..276 CDD:214473 78/270 (29%)

Return to query results.
Submit another query.